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SCNpilot_BF_INOC_scaffold_238

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_238_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2..337
DNA (336bp) protein (112aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCM2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEC89475.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holde
peptide ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_238_2
unknown

Not on your lists

358..537
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_238_3
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(657..2345)
DNA (1689bp) protein (563aa)
Recombinase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T8I1_9CLOT
Recombinase {ECO:0000313|EMBL:EGD49779.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
recombinase
SCNpilot_BF_INOC_scaffold_238_4
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2429..2719)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000378978B
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ91351.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus yo
SCNpilot_BF_INOC_scaffold_238_5
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2712..3152)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R6D8_CLOSW
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_BF_INOC_scaffold_238_6
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3589..4644)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZEJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ97096.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_238_7
unknown

Not on your lists

5109..5381
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_238_8
unknown

Not on your lists

5520..5690
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_238_9
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

5749..6198
DNA (450bp) protein (150aa)
protein tyrosine phosphatase; K03741 arsenate reductase [EC:1.20.4.1] Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
Low molecular weight phosphotyrosine protein phosphatase id=4289393 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
protein-tyrosine phosphatase
SCNpilot_BF_INOC_scaffold_238_10
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6246..6476)
DNA (231bp) protein (77aa)
Small redox-active disulfide protein 2 n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0A2_CLOCD
small redox-active disulfide protein 2
Small redox-active disulfide protein 2 {ECO:0000313|EMBL:AEV66909.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium c
SCNpilot_BF_INOC_scaffold_238_11
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6504..6743)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0A1_CLOCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV66908.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (str
SCNpilot_BF_INOC_scaffold_238_12
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(6785..7339)
DNA (555bp) protein (185aa)
Putative permease id=3182905 bin=GWF2_Clostridiales_36_10 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
putative permease Tax=GWF2_Clostridiales_36_10_curated
conserved membrane protein of unknown function
SCNpilot_BF_INOC_scaffold_238_13
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(7318..7800)
DNA (483bp) protein (161aa)
Putative permease id=3182901 bin=GWF2_Clostridiales_36_10 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
putative permease Tax=GWF2_Clostridiales_36_10_curated
putative permease
SCNpilot_BF_INOC_scaffold_238_14
Desulfosporosinus sp. HMP52, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7832..8836)
DNA (1005bp) protein (335aa)
Putative permease n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W8Y0_DESOD
permease
Permease {ECO:0000313|EMBL:KGK92054.1}; TaxID=1487923 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. HMP52.;"
SCNpilot_BF_INOC_scaffold_238_15
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8855..9208)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24NC4_DESHY
Transcriptional regulator {ECO:0000313|EMBL:KJS48726.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_238_16
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9403..9723
DNA (321bp) protein (107aa)
Transcriptional regulator, ArsR family n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWS8_CLOSD
Transcriptional regulator, ArsR family
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CBH20893.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostrid
SCNpilot_BF_INOC_scaffold_238_17
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9724..11361
DNA (1638bp) protein (546aa)
Dehydrogenase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FPE6_CLOPA
Dehydrogenase {ECO:0000313|EMBL:ETD65746.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
NAD(FAD)-dependent dehydrogenase
SCNpilot_BF_INOC_scaffold_238_18
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11358..11918
DNA (561bp) protein (187aa)
Thioredoxin n=2 Tax=Dehalobacter RepID=K4KYD0_9FIRM
Thioredoxin
Thioredoxin {ECO:0000313|EMBL:AFV04230.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
SCNpilot_BF_INOC_scaffold_238_19
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11915..12607
DNA (693bp) protein (231aa)
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KJS21437.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
Putative cytochrome c biogenesis protein id=1780082 bin=GWD2_Clostridiales_32_59 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
putative cytochrome c biogenesis protein
SCNpilot_BF_INOC_scaffold_238_20
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12626..13144
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6UA47_ETHHY
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_BF_INOC_scaffold_238_21
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13172..13543
DNA (372bp) protein (124aa)
Arsenical resistance operon trans-acting repressor ArsD n=1 Tax=Bacillus coagulans 36D1 RepID=G2TMV8_BACCO
arsenical resistance operon trans-acting repressor ArsD
Arsenical resistance operon trans-acting repressor ArsD {ECO:0000313|EMBL:CEE00709.1}; TaxID=35841 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermoa
SCNpilot_BF_INOC_scaffold_238_22
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13545..15290
DNA (1746bp) protein (582aa)
Arsenical pump-driving ATPase {ECO:0000313|EMBL:CEE00710.1}; EC=3.6.3.16 {ECO:0000313|EMBL:CEE00710.1};; TaxID=35841 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source
Arsenite-activated ATPase ArsA n=1 Tax=Bacillus coagulans (strain 2-6) RepID=F7Z2M5_BACC6
arsenite-activated ATPase ArsA rbh
SCNpilot_BF_INOC_scaffold_238_23
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15326..16387
DNA (1062bp) protein (354aa)
Arsenite efflux transporter n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWS9_CLOSD
arsB; arsenite efflux transporter rbh
Arsenite efflux transporter {ECO:0000313|EMBL:CBH20894.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium stickla
SCNpilot_BF_INOC_scaffold_238_24
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16413..16835
DNA (423bp) protein (141aa)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DF21_9FIRM
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:ERI94948.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral t
arsC; protein ArsC
SCNpilot_BF_INOC_scaffold_238_25
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16963..17790
DNA (828bp) protein (276aa)
CobW/P47K family protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PNZ1_9CLOT
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:EET89069.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivoran
CobW/P47K family protein
SCNpilot_BF_INOC_scaffold_238_26
unknown

Not on your lists

18367..20118
DNA (1752bp) protein (584aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_238_27
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20285..21124)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AVQ3_9CLOT
Membrane protein {ECO:0000313|EMBL:KGG81313.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.
YitT family protein
SCNpilot_BF_INOC_scaffold_238_28
Paenibacillus sp. HGF5, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21197..22138
DNA (942bp) protein (314aa)
UbiA prenyltransferase n=1 Tax=Paenibacillus vortex V453 RepID=E5YVV6_9BACL
Putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000313|EMBL:EGG32239.1}; TaxID=908341 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Pae
1,4-dihydroxy-2-naphthoate octaprenyltransferase
SCNpilot_BF_INOC_scaffold_238_29
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22160..23761
DNA (1602bp) protein (534aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WDP1_DESOD
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AET68366.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfospor
SCNpilot_BF_INOC_scaffold_238_30
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23795..25117)
DNA (1323bp) protein (441aa)
Na+/H+ antiporter NhaC n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5DYU4_9FIRM
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:CCU78760.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum
mleN; malate-2H(+)/Na(+)-lactate antiporter MleN
Displaying items 1-30 of 82 in total

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