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SCNpilot_BF_INOC_scaffold_481

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_481_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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127..414
-----------------
DNA (288bp)
protein (96aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R6I2_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL05392.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040
SCNpilot_BF_INOC_scaffold_481_2
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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506..790
-----------------
DNA (285bp)
protein (95aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R6I1_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL05391.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040
SCNpilot_BF_INOC_scaffold_481_3
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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813..1016
-----------------
DNA (204bp)
protein (68aa)
Resolvase domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R5W6_CLOSW
resolvase domain-containing protein
Resolvase domain protein {ECO:0000313|EMBL:ADL05299.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040
SCNpilot_BF_INOC_scaffold_481_4
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1638..2000)
-----------------
DNA (363bp)
protein (121aa)
Sulfurtransferase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FVM9_CLOPA
Sulfurtransferase {ECO:0000313|EMBL:ETD67778.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
rhodanese-like sulfurtransferase
SCNpilot_BF_INOC_scaffold_481_5
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2002..2526)
-----------------
DNA (525bp)
protein (175aa)
Transcriptional regulator n=2 Tax=Clostridium saccharoperbutylacetonicum RepID=M1LV65_9CLOT
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGF57005.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylaceto
SCNpilot_BF_INOC_scaffold_481_6
unknown

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2939..3340
-----------------
DNA (402bp)
protein (134aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_481_7
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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3529..3996
-----------------
DNA (468bp)
protein (156aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KK35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30702.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
HTH/TPR domain-containing protein
SCNpilot_BF_INOC_scaffold_481_8
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4426..5001
-----------------
DNA (576bp)
protein (192aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BXU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX60470.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrog
DNA-binding protein
SCNpilot_BF_INOC_scaffold_481_9
unknown

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5319..5738
-----------------
DNA (420bp)
protein (140aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_481_10
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5878..6093
-----------------
DNA (216bp)
protein (72aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RA52_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL06024.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040
SCNpilot_BF_INOC_scaffold_481_11
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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6063..9842
-----------------
DNA (3780bp)
protein (1260aa)
Cell wall/surface repeat protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TP27_ALKMQ
cell wall/surface repeat-containing protein
Tax=BJP_IG2157_Clostridiales_35_16
SCNpilot_BF_INOC_scaffold_481_12
unknown

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9842..9976
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_481_13
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10317..11054
-----------------
DNA (738bp)
protein (246aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RA55_CLOSW
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ADL06027.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium sacch
SCNpilot_BF_INOC_scaffold_481_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11051..12337
-----------------
DNA (1287bp)
protein (429aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUF6_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96643.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
SCNpilot_BF_INOC_scaffold_481_15
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12925..13806
-----------------
DNA (882bp)
protein (294aa)
Hydrolase, carbon-nitrogen family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D7T0_9FIRM
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:ERI92383.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
carbon-nitrogen family hydrolase
SCNpilot_BF_INOC_scaffold_481_16
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14031..14792
-----------------
DNA (762bp)
protein (254aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D6J4_PAESJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CQR57949.1}; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus riograndensis SBR5.;"
SCNpilot_BF_INOC_scaffold_481_17
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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14927..15901
-----------------
DNA (975bp)
protein (325aa)
Zn-dependent oxidoreductase, NADPH:quinone reductase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R8A2_OWEHD
hypothetical protein Tax=RBG_16_Actinobacteria_64_13_curated
Zn-dependent oxidoreductase
SCNpilot_BF_INOC_scaffold_481_18
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15986..16375
-----------------
DNA (390bp)
protein (130aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TUI4_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR49852.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (stra
SCNpilot_BF_INOC_scaffold_481_19
Exiguobacterium sp. AT1b, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16605..17675
-----------------
DNA (1071bp)
protein (357aa)
Glycoside hydrolase family 5 n=1 Tax=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) RepID=C4L676_EXISA
glycoside hydrolase family protein
Glycoside hydrolase family 5 {ECO:0000313|EMBL:ACQ69907.1}; TaxID=360911 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobac
SCNpilot_BF_INOC_scaffold_481_20
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17749..18738
-----------------
DNA (990bp)
protein (330aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SNV7_CLOC7
transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ADL49978.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulov
SCNpilot_BF_INOC_scaffold_481_21
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18839..19597
-----------------
DNA (759bp)
protein (253aa)
AraC type HTH-domain containing protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYP3_CLOA9
AraC type HTH-domain containing protein
AraC type HTH-domain containing protein {ECO:0000313|EMBL:AFS77541.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATC
SCNpilot_BF_INOC_scaffold_481_22
Bacillus cellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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19645..20349
-----------------
DNA (705bp)
protein (235aa)
Transglutaminase domain-containing protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXN1_CLOA9
transglutaminase domain-containing protein rbh
Transglutaminase domain-containing protein {ECO:0000313|EMBL:ADU29098.1}; TaxID=649639 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus cellulosilyticus (s
SCNpilot_BF_INOC_scaffold_481_23
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20402..20923
-----------------
DNA (522bp)
protein (174aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MWI5_9CLOT
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AGF58956.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharo
SCNpilot_BF_INOC_scaffold_481_24
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21220..21954
-----------------
DNA (735bp)
protein (245aa)
Uncharacterized membrane protein,ortholog of YDFK B.subtilis n=3 Tax=Clostridium acetobutylicum RepID=Q97J04_CLOAB
yqgA; hypothetical protein
Uncharacterized membrane protein,ortholog of YDFK B.subtilis {ECO:0000313|EMBL:AAK79450.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
SCNpilot_BF_INOC_scaffold_481_25
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22015..22590)
-----------------
DNA (576bp)
protein (192aa)
Transcriptional regulator n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W6B0_DESOD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AET68117.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis
SCNpilot_BF_INOC_scaffold_481_26
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22735..23928
-----------------
DNA (1194bp)
protein (398aa)
MFS transporter n=1 Tax=Paenibacillus polymyxa RepID=UPI00030895D9
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AIF53105.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.
SCNpilot_BF_INOC_scaffold_481_27
unknown

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24068..24958
-----------------
DNA (891bp)
protein (297aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_481_28
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25037..25303
-----------------
DNA (267bp)
protein (89aa)
Uncharacterized protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CG29_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:KFF08876.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis
hypothetical protein
SCNpilot_BF_INOC_scaffold_481_29
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25453..27141
-----------------
DNA (1689bp)
protein (563aa)
Subtilisin {ECO:0000313|EMBL:EHI98818.1}; EC=3.4.21.62 {ECO:0000313|EMBL:EHI98818.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
Subtilisin n=1 Tax=Clostridium sp. DL-VIII RepID=G7M0B3_9CLOT
peptidase S8/S53 subtilisin kexin sedolisin
SCNpilot_BF_INOC_scaffold_481_30
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27157..27864
-----------------
DNA (708bp)
protein (236aa)
Response regulator receiver domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CY93_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:ERI89540.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str.
regulatory protein
Displaying items 1-30 of 39 in total

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