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SCNpilot_BF_INOC_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 417 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_50_1
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1383..2321
DNA (939bp) protein (313aa)
Diacylglycerol kinase catalytic region n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKR1_ALKOO
diacylglycerol kinase catalytic subunit
Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:ABW20393.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremla
SCNpilot_BF_INOC_scaffold_50_2
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

2444..3886
DNA (1443bp) protein (481aa)
Aor transcriptional regulator id=2024360 bin=GWB2_Clostridiales_37_7 species=Clostridium saccharoperbutylacetonicum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
aorR; aor transcriptional regulator Tax=GWB2_Clostridiales_37_7_curated
SCNpilot_BF_INOC_scaffold_50_3
unknown

Not on your lists

4404..4814
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_50_4
unknown

Not on your lists

4818..5207
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_50_5
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

5220..5933
DNA (714bp) protein (238aa)
Putative uncharacterized protein id=2273536 bin=GWB2_Clostridiales_37_7 species=Cellulosilyticum lentocellum genus=Cellulosilyticum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
hypothetical protein Tax=GWB2_Clostridiales_37_7_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_50_6
unknown

Not on your lists

5937..6593
DNA (657bp) protein (219aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_50_7
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7123..8544
DNA (1422bp) protein (474aa)
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GET1_9FIRM
RNA-directed DNA polymerase (Reverse transcriptase) {ECO:0000313|EMBL:EEG78113.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="D
RNA-directed DNA polymerase
SCNpilot_BF_INOC_scaffold_50_8
Firmicutes bacterium CAG:536, Firmicutes, Bacteria

Not on your lists

8667..9125
DNA (459bp) protein (153aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1263028 species="Bacteria; Firmicutes; environmental samples.;" source="Firmi
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Firmicutes bacterium CAG:536 RepID=R5Z490_9FIRM
CMP/dCMP deaminase zinc-binding protein
SCNpilot_BF_INOC_scaffold_50_9
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9652..11508
DNA (1857bp) protein (619aa)
HD-GYP domain protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CDJ7_9CLOT
HD-GYP domain protein {ECO:0000313|EMBL:EOD00365.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatien
putative domain HDIG-containing protein
SCNpilot_BF_INOC_scaffold_50_10
ACD4, Gracilibacteria, Bacteria

Not on your lists

11498..13390
DNA (1893bp) protein (631aa)
HD-GYP domain protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CDJ7_9CLOT
putative PAS/PAC sensor protein Tax=ACD4
putative PAS/PAC sensor protein
SCNpilot_BF_INOC_scaffold_50_11
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13415..15079
DNA (1665bp) protein (555aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunits gamma and tau n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CUL8_9CLOT
DNA polymerase III subunit gamma/tau {ECO:0000313|EMBL:KGG80916.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobact
SCNpilot_BF_INOC_scaffold_50_12
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15105..15443
DNA (339bp) protein (113aa)
Nucleoid-associated protein M918_23205 n=1 Tax=Clostridium sp. BL8 RepID=T0NFH0_9CLOT
transcriptional regulatory protein
Nucleoid-associated protein M918_23205 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
SCNpilot_BF_INOC_scaffold_50_13
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15453..16052
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXL9_CLOA9
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;
recR; recombination protein RecR
SCNpilot_BF_INOC_scaffold_50_14
unknown

Not on your lists

16157..17311
DNA (1155bp) protein (385aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_50_15
Thermoanaerobacter mathranii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

17311..18486
DNA (1176bp) protein (392aa)
secretion system protein E n=1 Tax=Thermoanaerobacter indiensis RepID=UPI000369007D
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:ADH59849.1}; TaxID=583358 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source=
SCNpilot_BF_INOC_scaffold_50_16
unknown

Not on your lists

18483..19361
DNA (879bp) protein (293aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_50_17
unknown

Not on your lists

19404..20009
DNA (606bp) protein (202aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_50_18
unknown

Not on your lists

20022..20261
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_50_19
unknown

Not on your lists

20261..20647
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_50_20
unknown

Not on your lists

20649..21095
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_50_21
unknown

Not on your lists

21172..21738
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_50_22
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

21832..23400
DNA (1569bp) protein (523aa)
Multi-sensor hybrid histidine kinase id=2152209 bin=GWE2_Bacteroidetes_29_8 species=Cyanobacterium stanieri genus=Cyanobacterium taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
multi-sensor hybrid histidine kinase Tax=GWE2_Bacteroidetes_29_8_curated
integral membrane sensor hybrid histidine kinase
SCNpilot_BF_INOC_scaffold_50_23
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23560..24714
DNA (1155bp) protein (385aa)
ypsC; putative RNA methyltransferase YpsC (EC:2.1.1.-)
Nucleic acid methylase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B9P0_CLOBO
Nucleic acid methylase {ECO:0000313|EMBL:KDR96224.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale
SCNpilot_BF_INOC_scaffold_50_24
unknown

Not on your lists

24736..25833
DNA (1098bp) protein (366aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_50_25
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25846..26562
DNA (717bp) protein (239aa)
Colicin V production protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R6W4_9CLOT
hypothetical protein
Colicin V production protein {ECO:0000313|EMBL:EPR13727.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyroso
SCNpilot_BF_INOC_scaffold_50_26
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26575..27171
DNA (597bp) protein (199aa)
SirA family protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJA2_ALKMQ
SirA family protein
SirA family protein {ECO:0000313|EMBL:ABR46270.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain Q
SCNpilot_BF_INOC_scaffold_50_27
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27256..27543
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B311_CLOA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS79849.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604
SCNpilot_BF_INOC_scaffold_50_28
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27527..27733
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M2G8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM57494.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 39
SCNpilot_BF_INOC_scaffold_50_29
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27850..28137
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=RS6_ALKOO
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000255|HAMAP-Rule:MF_00360}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (stra
SCNpilot_BF_INOC_scaffold_50_30
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28158..28601
DNA (444bp) protein (148aa)
Single-stranded DNA-binding protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRB9_ALKMQ
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=293826 species="Bacteria; Firmicutes; Clostrid
Displaying items 1-30 of 417 in total

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