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SCNpilot_BF_INOC_scaffold_67

Search features with annotation key words

Displaying items 121-150 of 179 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_67_121
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(117139..118197)
DNA (1059bp) protein (353aa)
Ornithine racemase {ECO:0000313|EMBL:CDF58307.1}; EC=5.1.1.12 {ECO:0000313|EMBL:CDF58307.1};; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" s
Ornithine racemase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RQ19_9CLOT
alanine racemase domain-containing protein
SCNpilot_BF_INOC_scaffold_67_122
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(118207..119580)
DNA (1374bp) protein (458aa)
Putative reactivating factor for D-ornithine aminomutase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AW36_9CLOT
Putative reactivating factor for D-ornithine aminomutase {ECO:0000313|EMBL:EOD01388.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" sou
putative component of D-ornithine aminomutase
SCNpilot_BF_INOC_scaffold_67_123
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(119723..121936)
DNA (2214bp) protein (738aa)
D-ornithine aminomutase E component n=1 Tax=Fusobacterium nucleatum subsp. animalis D11 RepID=D6BCX4_FUSNU
D-ornithine aminomutase E component {ECO:0000313|EMBL:EFD80021.2}; TaxID=556264 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum sub
cobalamin B12-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_67_124
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(121936..122313)
DNA (378bp) protein (126aa)
oraS; D-ornithine aminomutase S component (EC:5.4.3.5)
D-ornithine 4,5-aminomutase subunit alpha; EC=5.4.3.5 {ECO:0000312|EMBL:CBH21411.1};; D-ornithine aminomutase S component {ECO:0000303|PubMed:11577113}; Short=OAM-S;; TaxID=499177 species="Bacteria; F
D-ornithine 4,5-aminomutase subunit alpha n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=OAMS_CLOSD
SCNpilot_BF_INOC_scaffold_67_125
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(122366..123772)
DNA (1407bp) protein (469aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MGL4_ALKOO
pyridoxal-5'-phosphate-dependent protein beta subunit
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:ABW19237.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alka
SCNpilot_BF_INOC_scaffold_67_126
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(123762..124073)
DNA (312bp) protein (104aa)
2-amino-4-ketopentanoate thiolase subunit alpha n=1 Tax=[Clostridium] glycolicum RepID=UPI000378223E
2-amino-4-ketopentanoate thiolase {ECO:0000313|EMBL:KHS57727.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporoba
hypothetical protein
SCNpilot_BF_INOC_scaffold_67_127
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(124088..125137)
DNA (1050bp) protein (350aa)
dihydrodipicolinate reductase n=1 Tax=Clostridium tunisiense RepID=UPI0002F15C16
Dihydrodipicolinate reductase {ECO:0000313|EMBL:EQB87160.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
dihydrodipicolinate reductase
SCNpilot_BF_INOC_scaffold_67_128
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

125476..126405
DNA (930bp) protein (310aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TUJ1_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR49859.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (stra
SCNpilot_BF_INOC_scaffold_67_129
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(126380..128245)
DNA (1866bp) protein (622aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SVN2_SYNGF
diguanylate cyclase/phosphodiesterase rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ADY54508.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus
SCNpilot_BF_INOC_scaffold_67_130
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(128383..129783)
DNA (1401bp) protein (467aa)
Arginine utilization regulatory protein RocR n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AXK2_9CLOT
ATPase AAA {ECO:0000313|EMBL:KGG81495.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
sigma-54 dependent trancsriptional regulator
SCNpilot_BF_INOC_scaffold_67_131
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(129800..130237)
DNA (438bp) protein (146aa)
Positive regulator of sigma E, RseC/MucC n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TQP8_ALKMQ
Sigma E positive regulator RseC/MucC {ECO:0000313|EMBL:KJF28061.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
sigma E positive regulator RseC/MucC
SCNpilot_BF_INOC_scaffold_67_132
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(130269..132062)
DNA (1794bp) protein (598aa)
aspS; aspartyl-tRNA synthetase AspS (EC:6.1.1.12)
Aspartyl-tRNA synthetase AspS {ECO:0000313|EMBL:AFS78736.1}; EC=6.1.1.12 {ECO:0000313|EMBL:AFS78736.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source=
Aspartate--tRNA ligase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B261_CLOA9
SCNpilot_BF_INOC_scaffold_67_133
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(132077..133540)
DNA (1464bp) protein (488aa)
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:CEP82081.1}; EC=1.3.99.22 {ECO:0000313|EMBL:CEP82081.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; P
coproporphyrinogen III oxidase (EC:1.3.99.22)
coproporphyrinogen III oxidase n=1 Tax=[Clostridium] glycolicum RepID=UPI00036B4247
SCNpilot_BF_INOC_scaffold_67_134
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(133544..134173)
DNA (630bp) protein (210aa)
Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:EOD00656.1}; EC=3.1.2.6 {ECO:0000313|EMBL:EOD00656.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldi
Hydroxyacylglutathione hydrolase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CPQ6_9CLOT
beta-lactamase domain-containing protein
SCNpilot_BF_INOC_scaffold_67_135
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(134189..134638)
DNA (450bp) protein (150aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=1121324 species="Bacte
dtd; D-tyrosyl-tRNA(Tyr) deacylase Dtd (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Peptostreptococcus anaerobius VPI 4330 RepID=L1MUQ9_9FIRM
SCNpilot_BF_INOC_scaffold_67_136
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(134647..136824)
DNA (2178bp) protein (726aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:ABR48507.1}; EC=2.7.6.5 {ECO:0000313|EMBL:ABR48507.1};; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkali
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TQN9_ALKMQ
SCNpilot_BF_INOC_scaffold_67_137
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(136957..137475)
DNA (519bp) protein (173aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CVI8_9CLOT
SCNpilot_BF_INOC_scaffold_67_138
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(137521..139836)
DNA (2316bp) protein (772aa)
SsDNA-specific exonuclease RecJ {ECO:0000313|EMBL:CEP82086.1}; EC=3.1.-.- {ECO:0000313|EMBL:CEP82086.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pe
recJ; ssDNA-specific exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=2 Tax=Clostridium sordellii RepID=T0E6A9_CLOSO
SCNpilot_BF_INOC_scaffold_67_139
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(139833..140249)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TUC0_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR49788.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus me
SCNpilot_BF_INOC_scaffold_67_140
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(140413..141300)
DNA (888bp) protein (296aa)
Protein-export membrane protein SecF n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AU28_9CLOT
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaero
secF; SecYEG protein translocase auxillary subunit
SCNpilot_BF_INOC_scaffold_67_141
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(141306..142601)
DNA (1296bp) protein (432aa)
Protein translocase subunit SecD n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CVJ3_9CLOT
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobact
secDF; protein-export membrane protein SecDF
SCNpilot_BF_INOC_scaffold_67_142
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(142614..143120)
DNA (507bp) protein (169aa)
Carbonic anhydrase, family 3 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CEE3_9CLOT
Carbonic anhydrase, family 3 {ECO:0000313|EMBL:EOD00665.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kirit
carbonic anhydrase/acetyltransferase
SCNpilot_BF_INOC_scaffold_67_143
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(143249..144607)
DNA (1359bp) protein (453aa)
Radical SAM domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MGN5_ALKOO
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ABW19258.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain
SCNpilot_BF_INOC_scaffold_67_144
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(144679..144819)
DNA (141bp) protein (47aa)
Six-cysteine peptide SCIFF n=1 Tax=Clostridium termitidis CT1112 RepID=S0FTP7_9CLOT
Six-cysteine peptide SCIFF {ECO:0000313|EMBL:EMS71868.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis
rSAM-modified six-cysteine peptide SCIFF
SCNpilot_BF_INOC_scaffold_67_145
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(145010..145321)
DNA (312bp) protein (104aa)
Preprotein translocase, YajC subunit n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9R3_9FIRM
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EUC78406.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacter
hypothetical protein
SCNpilot_BF_INOC_scaffold_67_146
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(145403..146527)
DNA (1125bp) protein (375aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
tgt; queuine tRNA-ribosyltransferase Tgt (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VVR4_CLOBI
SCNpilot_BF_INOC_scaffold_67_147
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(146544..147566)
DNA (1023bp) protein (341aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R317_CLOPF
SCNpilot_BF_INOC_scaffold_67_148
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(147600..149369)
DNA (1770bp) protein (590aa)
SpoIID/LytB domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TQM6_ALKMQ
lytB; amidase enhancer
Amidase enhancer {ECO:0000313|EMBL:AHM56263.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
SCNpilot_BF_INOC_scaffold_67_149
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(149366..150409)
DNA (1044bp) protein (348aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiale
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=RUVB_ALKMQ
SCNpilot_BF_INOC_scaffold_67_150
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(150435..151031)
DNA (597bp) protein (199aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Peptostreptococcus anaerobius VPI 4330 RepID=L1MFI5_9FIRM
ruvA; Holliday junction DNA helicase RuvA
Displaying items 121-150 of 179 in total

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