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SCNpilot_BF_INOC_scaffold_67_130

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: comp(128383..129783)

Top 3 Functional Annotations

Value Algorithm Source
Arginine utilization regulatory protein RocR n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AXK2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 474.0
  • Bit_score: 508
  • Evalue 6.70e-141
ATPase AAA {ECO:0000313|EMBL:KGG81495.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 477.0
  • Bit_score: 521
  • Evalue 1.40e-144
sigma-54 dependent trancsriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 469.0
  • Bit_score: 506
  • Evalue 9.40e-141

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Taxonomy

Caloranaerobacter azorensis → Caloranaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1401
ATGTCAGTTGATAGAGTACTTCATCTAGCGAGTCGTAAAATCCTAGATTCTATAGAAGAAGGCGTTCATATCGTCGACAAAAAAGGTCGAACGATACTTTACAATAAGGCGATAGAGGAAATTGAAGGGTTGAGTCATCAACAGGTGGTTGGTAAGCATCTACTGGATATTTTCCCTGACTGGACAAAAGAGAACAGTACATTGTTGACTGTTCTCTCTTCTGGTGTGCCCATCATTGACAGAGAACAAAGCTATTTGAATTTTAGGGGTAAAAACATTAAAACGGTAAATTCAACTTATCCTATTTTTGATGGGGAAGAGCTTATCGGTGCGATAGAGATCGCTAAAAACTTTACAACGGTTAATCATATGTCTGAGCAGATCATTGAGCTACAGCAGAAGCTTTTGAAACCAGTTAAAAAGGAAGCTGGTATTAGGCAATATCACTTTGAACAGTTAATTGGTAAAACAGATCGTTACCTTGAAGCTATTAAAATTGCTAGAAGAGCATCAAAATCGAATTCAAGTGTGTTAATTTATGGTGATACTGGAACGGGTAAAGAGCTGTTTGCACAAAGCATTCATTATGCGAGCGAGCGTAAATCTAAGCCATTCATTGCTCAAAACTGTGCTGCGATCCCTGAAACCCTATTAGAAGGCTTATTATTTGGTACGGCAAAAGGCTCATTTACAGGTGCAACGGATCGACCAGGGTTATTCGAACAGGCAGATGGTGGTACCTTGTTTTTGGATGAAGTTAATAGCATGAGTTTGGCTTTGCAGGCTAAAATATTAAGGGTTCTACAGGAAAACTATGTGAGACGGGTTGGTGGCACAAAGGATGTTCCGATTGATGTTCGCATCATAGCAGCAACCAATGAGGAGCCAGAGCTTTTAATTACTGATGGACAGTTTCGCAAGGATTTATATTATCGATTGAATGTTATCAACATAAGAATTCCAAGCTTAAATGAGAGAGTGGAGGATATCCCGCTTTTGGTGGATTACTTCATTCGCGAGTACAATGAACAGCTTGGTAAGGATGTTTGGATGGTATCATCTGAATTATTAGAGGCGTTTAAACGCTATAACTGGGCGGGTAATATTAGAGAATTAAAAAACTTTATTGAATCCGCTATGAATTTAATCTCTGATGAGCACGTTATTGGAAAAGAGCATATGCCATCTCATGTGGCAGAAGTGCTACTGAAAAAAAGTCATTACATTCCAGATGCTGGAGTCATTGTCTCTGACTTGAATGCGCATTTGAGACTTATTGAAAAAGAGATTATTATCACTACCCTGGACAAATGTAATCATAATGTTTCTAAGGCTGCAAAGCAGCTGAACTTATCTAGGCAAAATTTGCAATATAAAATTAAACAGTTTGATATCGTGTAA
PROTEIN sequence
Length: 467
MSVDRVLHLASRKILDSIEEGVHIVDKKGRTILYNKAIEEIEGLSHQQVVGKHLLDIFPDWTKENSTLLTVLSSGVPIIDREQSYLNFRGKNIKTVNSTYPIFDGEELIGAIEIAKNFTTVNHMSEQIIELQQKLLKPVKKEAGIRQYHFEQLIGKTDRYLEAIKIARRASKSNSSVLIYGDTGTGKELFAQSIHYASERKSKPFIAQNCAAIPETLLEGLLFGTAKGSFTGATDRPGLFEQADGGTLFLDEVNSMSLALQAKILRVLQENYVRRVGGTKDVPIDVRIIAATNEEPELLITDGQFRKDLYYRLNVINIRIPSLNERVEDIPLLVDYFIREYNEQLGKDVWMVSSELLEAFKRYNWAGNIRELKNFIESAMNLISDEHVIGKEHMPSHVAEVLLKKSHYIPDAGVIVSDLNAHLRLIEKEIIITTLDKCNHNVSKAAKQLNLSRQNLQYKIKQFDIV*