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SCNpilot_BF_INOC_scaffold_0_111

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 129244..130461

Top 3 Functional Annotations

Value Algorithm Source
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Rumin similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 352.0
  • Bit_score: 399
  • Evalue 7.00e-108
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium termitidis CT1112 RepID=S0FPG6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 352.0
  • Bit_score: 399
  • Evalue 5.00e-108
ribosome small subunit-dependent GTPase A similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 354.0
  • Bit_score: 397
  • Evalue 5.30e-108
  • rbh

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Taxonomy

[Clostridium] termitidis → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1218
ATGCATTTAGAAGCAAAAATGGAAAATGATAATGATAATAATAAAAGTAAAAGTAAAAGTAAAAGTAAAAGTAAAAGTAATAAAGTCAATTCAGCTATATTAACGAGCAAAAACGAAGAAAAGGGAAGTGATTGGATGATTTTAACGCAATATGGATTCAGTGATTTTTTTAAGGACCAATACGTGACTAGGTTAAGAGAAATTGAGAATCAAAAAAAGGATTTGTATGAAATTTATCAACCTGCGAGAGTGATAGCAGATTTCGGTCAAAAGATAAAGGTTATGACTGAAGACGGGGAAAGAACAGTTGCTAGACCGCAACGTTCTCATATTTTTGATCAACAAATTGCAACCGGTGACTGGATTGTTGCTGGATTTATGAATGATTTTGATGAAGGCACTGTTAAAGCTGTCCTAAGTAGAATGACAAAATTTTCAAGAGCTGCTGCTGGGAAAGAAGTAAAAGAGCAAATAGTTGCAACGAATGTCGACACAGTGTTTATAATTCAGTCATTAAATCACGATTTTAACATGAGGCGTCTAGAACGTTATCTGGTGGCGGCTTGGGATAGTGGTGCTAATCCGGTCATTGTTTTAACCAAGTTAGATCTATGCGATGATGTTATGGAAAAGCTGATGGTGGTATATGAGATCGCCCCAGGTGTCGATGTCATTCCAGTGAGCAGTTTTACAGGGGAGGGAATTAAAGAACTAGATAGATATATCGGAATTGGAAAAACCATAGCAGTAATGGGTTCATCTGGCGTTGGCAAGTCAACTTTAATCAATACACTGATTGGTAGACCGGTTTTAAAGACTCAGAATATTCGAGAGGATGACAGTAAAGGCAGACATACCACTACACATAGAGAGCTTGTGGTGATGGAAAATGGCGGCATTTTAATGGACACGCCTGGAATGAGAACCCTATCCTTATGGGAATCCGACGAAGGTATGGAGAAAATGTTCGGCGAAATAGAAAGACTGGTAAAATCATGTCGATTTAATGATTGTACGCATCACAATGAACCTGGCTGTGCCGTACAAGCTGCAATTTTTAAAGGTGAGCTAGATCAGCGAAGATGGGAAAGCTGGAAAAAGCTTCAGAAGGAGCTGAGATTTCTAGATAAAAAAAAGGATTTGAAAATCAAATCCTTAGATCGAAAAAATCAAAAGCAACCGCCGAGACAGAAAAAGGTGAATATAGATGAATACTAA
PROTEIN sequence
Length: 406
MHLEAKMENDNDNNKSKSKSKSKSKSNKVNSAILTSKNEEKGSDWMILTQYGFSDFFKDQYVTRLREIENQKKDLYEIYQPARVIADFGQKIKVMTEDGERTVARPQRSHIFDQQIATGDWIVAGFMNDFDEGTVKAVLSRMTKFSRAAAGKEVKEQIVATNVDTVFIIQSLNHDFNMRRLERYLVAAWDSGANPVIVLTKLDLCDDVMEKLMVVYEIAPGVDVIPVSSFTGEGIKELDRYIGIGKTIAVMGSSGVGKSTLINTLIGRPVLKTQNIREDDSKGRHTTTHRELVVMENGGILMDTPGMRTLSLWESDEGMEKMFGEIERLVKSCRFNDCTHHNEPGCAVQAAIFKGELDQRRWESWKKLQKELRFLDKKKDLKIKSLDRKNQKQPPRQKKVNIDEY*