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SCNpilot_BF_INOC_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 619 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_0_1
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..1785
DNA (1785bp) protein (595aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2JGI8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY65631.1}; Flags: Precursor;; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
SCNpilot_BF_INOC_scaffold_0_2
Geomicrobium sp. JCM 19055, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1988..2977
DNA (990bp) protein (330aa)
Oligopeptide transport system permease protein AppB n=1 Tax=Clostridium ultunense Esp RepID=M1ZJ75_9CLOT
Oligopeptide transport system permease protein OppB {ECO:0000313|EMBL:GAJ97168.1}; TaxID=1460649 species="Bacteria; Firmicutes; Bacilli; Bacillales; Geomicrobium.;" source="Geomicrobium sp. JCM 19055.
dppB; dipeptide transporter; membrane component of ABC superfamily
SCNpilot_BF_INOC_scaffold_0_3
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2977..3822
DNA (846bp) protein (282aa)
Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) n=1 Tax=Caloramator australicus RC3 RepID=I7J4L3_9CLOT
Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) {ECO:0000313|EMBL:CCJ32716.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;"
binding-protein-dependent transport systems inner membrane component
SCNpilot_BF_INOC_scaffold_0_4
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3837..4391
DNA (555bp) protein (185aa)
GNAT family acetyltransferase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D15B
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDM69360.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
SCNpilot_BF_INOC_scaffold_0_5
Thermoanaerobacter italicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

4564..5796
DNA (1233bp) protein (411aa)
S-layer protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CHK2_9CLOT
S-layer domain-containing protein
S-layer domain protein {ECO:0000313|EMBL:ADD03467.1}; Flags: Precursor;; TaxID=580331 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;"
SCNpilot_BF_INOC_scaffold_0_6
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(5883..6290)
DNA (408bp) protein (136aa)
Hemerythrin n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CUF9_THEYO
Hemerythrin {ECO:0000313|EMBL:ERM92576.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subter
hemerythrin
SCNpilot_BF_INOC_scaffold_0_7

Not on your lists

6533..6844
DNA (312bp) protein (104aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XJT3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD25496.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_0_8
unknown

Not on your lists

7140..7247
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_0_9
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(7530..9647)
DNA (2118bp) protein (706aa)
pullulanase (EC:3.2.1.41); K01200 pullulanase [EC:3.2.1.41] Tax=GWB2_Clostridiales_37_7_curated
Pullulanase, type I id=1705019 bin=GWB2_Clostridiales_37_7 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
pullulanase
SCNpilot_BF_INOC_scaffold_0_10
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9676..12117)
DNA (2442bp) protein (814aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1444290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
Phosphorylase n=1 Tax=Clostridium novyi (strain NT) RepID=A0PY74_CLONN
glycogen phosphorylase
SCNpilot_BF_INOC_scaffold_0_11
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12128..13570)
DNA (1443bp) protein (481aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1304284 species="Bact
glgA; glycogen/starch synthase, ADP-glucose type family protein (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AVB9_9CLOT
SCNpilot_BF_INOC_scaffold_0_12
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13567..14703)
DNA (1137bp) protein (379aa)
Glycogen biosynthesis protein GlgD, glucose-1-phosphate adenylyltransferase family n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ATY4_9CLOT
Glycogen biosynthesis protein GlgD {ECO:0000313|EMBL:KDR96034.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridiu
glgD; glycogen biosynthesis protein GlgD
SCNpilot_BF_INOC_scaffold_0_13
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14709..15848)
DNA (1140bp) protein (380aa)
glgC; glucose-1-phosphate adenylyltransferase GlgC (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyr
Glucose-1-phosphate adenylyltransferase n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6CQ77_BACAZ
SCNpilot_BF_INOC_scaffold_0_14
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15852..17783)
DNA (1932bp) protein (644aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMA
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2LCC8_9FIRM
1,4-alpha-glucan branching protein
SCNpilot_BF_INOC_scaffold_0_15
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17822..18718)
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=1 Tax=Thermincola potens (strain JR) RepID=D5XCR2_THEPJ
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADG81688.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (
SCNpilot_BF_INOC_scaffold_0_16
unknown

Not on your lists

19011..19109
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_0_17
Bacillus bataviensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19163..20398
DNA (1236bp) protein (412aa)
Permease n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6CYU3_9BACI
Permease {ECO:0000313|EMBL:EKN65402.1}; TaxID=1117379 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus bataviensis LMG 21833.;"
ferroportin1 family protein
SCNpilot_BF_INOC_scaffold_0_18
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

20438..21460
DNA (1023bp) protein (341aa)
Transcriptional regulator, ArsR family n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CEW3_KOSOT
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACR79297.1}; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.
SCNpilot_BF_INOC_scaffold_0_19
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21651..25388
DNA (3738bp) protein (1246aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:ABW19758.1}; EC=6.3.5.3 {ECO:0000313|EMBL:ABW19758.1};; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIX6_ALKOO
SCNpilot_BF_INOC_scaffold_0_20
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25586..26386
DNA (801bp) protein (267aa)
Copper amine oxidase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VL58_CLOSH
copper amine oxidase domain protein
Copper amine oxidase domain protein {ECO:0000313|EMBL:AGC67201.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium ste
SCNpilot_BF_INOC_scaffold_0_21
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26565..27854
DNA (1290bp) protein (430aa)
Radical SAM domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MM33_ALKOO
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ABW18200.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain
SCNpilot_BF_INOC_scaffold_0_22
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27838..28584
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Desulfotomaculum RepID=F0DMD9_9FIRM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF93672.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carb
SCNpilot_BF_INOC_scaffold_0_23
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28670..29656
DNA (987bp) protein (329aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AIF53298.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AIF53298.1};; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus
UDP-glucose 4-epimerase n=1 Tax=Sporolactobacillus vineae RepID=UPI0002883F02
SCNpilot_BF_INOC_scaffold_0_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29669..30841
DNA (1173bp) protein (391aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia
Galactokinase n=1 Tax=Clostridium sp. CAG:265 RepID=R6KIC3_9CLOT
galactokinase
SCNpilot_BF_INOC_scaffold_0_25
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30831..32372
DNA (1542bp) protein (514aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-g
galT; galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CQF4_9CLOT
SCNpilot_BF_INOC_scaffold_0_26
Bacillus ginsengihumi, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32394..33392
DNA (999bp) protein (333aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=363870 species="Bacteria; Firmicutes; Bacil
Aldose 1-epimerase n=1 Tax=Anoxybacillus flavithermus AK1 RepID=M8DM72_9BACI
galM; aldose 1-epimerase
SCNpilot_BF_INOC_scaffold_0_27
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33596..34081
DNA (486bp) protein (162aa)
purE; N5-carboxyaminoimidazole ribonucleotide mutase PurE (EC:5.4.99.18)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
N5-carboxyaminoimidazole ribonucleotide mutase id=2290448 bin=GWB2_Clostridiales_37_7 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
SCNpilot_BF_INOC_scaffold_0_28
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34257..34961
DNA (705bp) protein (235aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6) rbh
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CCY9_9CLOT
SCNpilot_BF_INOC_scaffold_0_29
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34980..36392
DNA (1413bp) protein (471aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CTZ4_9CLOT
SCNpilot_BF_INOC_scaffold_0_30
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36430..37470
DNA (1041bp) protein (347aa)
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1) rbh
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000255|HAMAP-Rule:MF_00741}; EC=6.3.3.1 {ECO:0000255|HAMAP-Rule:MF_00741};; AIR synthase {ECO:0000255|HAMAP-Rule:MF_00741}; AIRS {ECO:0000255|HAMAP
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=PUR5_ALKOO
Displaying items 1-30 of 619 in total

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