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SCNpilot_BF_INOC_scaffold_0

Search features with annotation key words

Displaying items 601-619 of 619 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_0_601
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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663599..663976
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A387_MAHA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE96320.1}; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sed
SCNpilot_BF_INOC_scaffold_0_602
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

664029..664499
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PU57_CLOSD
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CBH20318.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii
SCNpilot_BF_INOC_scaffold_0_603
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

664513..665958
DNA (1446bp) protein (482aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PU58_CLOSD
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CBH20319.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii
SCNpilot_BF_INOC_scaffold_0_604
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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665968..668886
DNA (2919bp) protein (973aa)
Putative lipoprotein n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YDQ1_TREAZ
putative lipoprotein
Tax=BJP_IG2157_Anaerolineales_55_23
SCNpilot_BF_INOC_scaffold_0_605
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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668904..669956
DNA (1053bp) protein (351aa)
Twitching motility protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W4U3_DESAS
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:ACV63979.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidan
SCNpilot_BF_INOC_scaffold_0_606
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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669967..671052
DNA (1086bp) protein (362aa)
Putative Type IV pilus assembly protein PilM n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PU60_CLOSD
type IV pilus assembly protein PilM
Uncharacterized protein {ECO:0000313|EMBL:KJF28125.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
SCNpilot_BF_INOC_scaffold_0_607
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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671064..671624
DNA (561bp) protein (187aa)
Fimbrial assembly family protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TTT3_ALKMQ
fimbrial assembly family protein
Fimbrial assembly family protein {ECO:0000313|EMBL:ABR49601.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredig
SCNpilot_BF_INOC_scaffold_0_608
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

671614..672813
DNA (1200bp) protein (400aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TTT2_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR49600.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (stra
SCNpilot_BF_INOC_scaffold_0_609
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

672824..674371
DNA (1548bp) protein (516aa)
S-layer domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TTT1_ALKMQ
S-layer protein
S-layer domain protein {ECO:0000313|EMBL:ABR49599.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus met
SCNpilot_BF_INOC_scaffold_0_610
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

674457..675113
DNA (657bp) protein (219aa)
putative Type IV fimbrial biogenesis protein, prepilin cysteine protease (C20) PilD (EC:3.4.23.43)
Putative Type IV fimbrial biogenesis protein, prepilin cysteine protease (C20) PilD {ECO:0000313|EMBL:CBH20350.1}; EC=3.4.23.43 {ECO:0000313|EMBL:CBH20350.1};; TaxID=499177 species="Bacteria; Firmicut
Putative Type IV fimbrial biogenesis protein, prepilin cysteine protease (C20) PilD n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PU89_CLOSD
SCNpilot_BF_INOC_scaffold_0_611
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

675142..676206
DNA (1065bp) protein (355aa)
Putative HD-GYP domain n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PTH6_CLOSD
Metal dependent phosphohydrolase {ECO:0000313|EMBL:KDR95414.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium]
putative HD-GYP domain
SCNpilot_BF_INOC_scaffold_0_612
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

676221..679013
DNA (2793bp) protein (931aa)
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
SCNpilot_BF_INOC_scaffold_0_613
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(679043..680335)
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002DCAFA9
major facilitator superfamily protein
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_BF_INOC_scaffold_0_614
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

680484..680867
DNA (384bp) protein (128aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridium ultunense Esp RepID=M1YQM1_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1288971 species="Bacteria; Firmicutes; Clostri
ssb2; ssDNA-binding protein
SCNpilot_BF_INOC_scaffold_0_615
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

680998..682050
DNA (1053bp) protein (351aa)
Putative metal-dependent phosphohydrolase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CPH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGG79764.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
metal dependent phosphohydrolase
SCNpilot_BF_INOC_scaffold_0_616
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

682203..684176
DNA (1974bp) protein (658aa)
topoisomerase B subunit (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000313|EMBL:AGC69445.1}; EC=5.99.1.3 {ECO:0000313|EMBL:AGC69445.1};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridi
DNA topoisomerase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2CBAB
SCNpilot_BF_INOC_scaffold_0_617
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


684193..686385
DNA (2193bp) protein (731aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcacea
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LW80_CLOCD
type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
SCNpilot_BF_INOC_scaffold_0_618
unknown

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686432..686821
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_0_619
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

687310..687387
DNA (78bp) protein (26aa)
id=7716470 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7716470 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
Displaying items 601-619 of 619 in total

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