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SCNpilot_BF_INOC_scaffold_0

Search features with annotation key words

Displaying items 511-540 of 619 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_0_511
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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561113..561976
DNA (864bp) protein (288aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CTV0_9CLOT
SCNpilot_BF_INOC_scaffold_0_512
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

562406..563464
DNA (1059bp) protein (353aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TL01_ALKMQ
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:KJF28666.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;
phospho-2-dehydro-3-deoxyheptonate aldolase
SCNpilot_BF_INOC_scaffold_0_513
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

563451..564596
DNA (1146bp) protein (382aa)
prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase {ECO:0000313|EMBL:ABR46871.1}; EC=1.3.1.12 {ECO:0000313|EMBL:ABR46871.1};; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.
Prephenate dehydrogenase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TL03_ALKMQ
SCNpilot_BF_INOC_scaffold_0_514
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

564601..565650
DNA (1050bp) protein (350aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1230342 species="Bacteri
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=2 Tax=Clostridium botulinum RepID=C5VNJ8_CLOBO
SCNpilot_BF_INOC_scaffold_0_515
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

565796..567058
DNA (1263bp) protein (421aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase n=2 Tax=Clostridium RepID=D8GP85_CLOLD
SCNpilot_BF_INOC_scaffold_0_516
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

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567048..568160
DNA (1113bp) protein (371aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
Chorismate synthase n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SUU2_SYNGF
SCNpilot_BF_INOC_scaffold_0_517
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

568157..569371
DNA (1215bp) protein (405aa)
pheA2; P-protein (EC:5.4.99.5 4.2.1.51)
Chorismate mutase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEM5_9CLOT
Chorismate mutase {ECO:0000313|EMBL:EKY26428.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
SCNpilot_BF_INOC_scaffold_0_518
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

569371..570312
DNA (942bp) protein (314aa)
3-dehydroquinate dehydratase (EC:2.7.1.71 4.2.1.10)
3-dehydroquinate dehydratase, type II n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MCC0_9FIRM
3-dehydroquinate dehydratase, type II {ECO:0000313|EMBL:EOS65522.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp
SCNpilot_BF_INOC_scaffold_0_519
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

570381..570956
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Spirochaeta alkalica RepID=UPI00035C7BC6
Putative metal-binding protein {ECO:0000313|EMBL:EQB27908.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 266
putative metal-binding protein
SCNpilot_BF_INOC_scaffold_0_520
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

570949..571794
DNA (846bp) protein (282aa)
Putative alpha-dextrin endo-1, 6-alpha-glucosidase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RUT3_9CLOT
Putative alpha-dextrin endo-1, 6-alpha-glucosidase {ECO:0000313|EMBL:CDF59238.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Therm
hypothetical protein
SCNpilot_BF_INOC_scaffold_0_521
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

571894..572898
DNA (1005bp) protein (335aa)
Transcriptional regulator, LacI family id=4682856 bin=GWC2_Tenericute_34_14 species=Paenibacillus curdlanolyticus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good +
Transcriptional regulator, LacI family
Tax=BJP_IG2102_Acholeplasmatales_34_18
SCNpilot_BF_INOC_scaffold_0_522
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

572998..576102
DNA (3105bp) protein (1035aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AUN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD00352.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
hypothetical protein
SCNpilot_BF_INOC_scaffold_0_523
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

576111..577472
DNA (1362bp) protein (454aa)
glucosylceramidase (EC:3.2.1.45)
O-Glycosyl hydrolase family 30 n=1 Tax=Agarivorans albus MKT 106 RepID=R9PKV1_AGAAL
O-Glycosyl hydrolase family 30 {ECO:0000313|EMBL:GAD01873.1}; TaxID=1331007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans.;" source="Agarivoran
SCNpilot_BF_INOC_scaffold_0_524
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

577908..579476
DNA (1569bp) protein (523aa)
Family 1 extracellular solute-binding protein n=1 Tax=Haloplasma contractile SSD-17B RepID=F7PRN3_9BACT
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:ERJ11887.1}; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
sugar ABC transporter substrate-binding protein
SCNpilot_BF_INOC_scaffold_0_525
Exiguobacterium sp. AT1b, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

579633..580598
DNA (966bp) protein (322aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) RepID=C4L1S2_EXISA
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACQ71104.1}; TaxID=360911 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sed
SCNpilot_BF_INOC_scaffold_0_526
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

580591..581496
DNA (906bp) protein (302aa)
L-arabinose transport system permease protein AraQ n=1 Tax=Haloplasma contractile SSD-17B RepID=F7PWG5_9BACT
L-arabinose transport system permease protein AraQ {ECO:0000313|EMBL:ERJ11885.1}; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-1
sugar ABC transporter permease
SCNpilot_BF_INOC_scaffold_0_527
Bacillus selenatarsenatis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

581535..584954
DNA (3420bp) protein (1140aa)
Putative uncharacterized protein n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TWR4_BACCJ
Uncharacterized protein {ECO:0000313|EMBL:GAM15733.1}; TaxID=1321606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus selenatarsenatis SF-1.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_0_528
Paenibacillus borealis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

585062..585664
DNA (603bp) protein (201aa)
Transcriptional regulator, PadR family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EL99_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ60415.1}; TaxID=160799 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus borealis.;"
SCNpilot_BF_INOC_scaffold_0_529
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

585648..586376
DNA (729bp) protein (243aa)
4Fe-4S ferredoxin n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7HZM1_9CLOT
4Fe-4S ferredoxin {ECO:0000313|EMBL:ETA79073.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
4Fe-4S binding domain/4Fe-4S dicluster domain-containing
SCNpilot_BF_INOC_scaffold_0_530
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

586554..586754
DNA (201bp) protein (67aa)
Cold shock protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KII1_CLOPA
Cold-shock protein {ECO:0000313|EMBL:KJF27092.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
cold shock protein
SCNpilot_BF_INOC_scaffold_0_531
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(586909..587763)
DNA (855bp) protein (285aa)
Beta-glucosidase n=2 Tax=Clostridium butyricum RepID=B1R1K1_CLOBU
Beta-glucosidase {ECO:0000313|EMBL:ETI87658.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
glycoside hydrolase family protein
SCNpilot_BF_INOC_scaffold_0_532
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(587802..588896)
DNA (1095bp) protein (365aa)
bglB; thermostable beta-glucosidase B (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XHY2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY95201.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
SCNpilot_BF_INOC_scaffold_0_533
Thermotoga neapolitana, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(588905..589459)
DNA (555bp) protein (185aa)
Alpha-xylosidase n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9KC10_THENN
alpha-xylosidase YicI
Alpha-xylosidase {ECO:0000313|EMBL:ACM22556.1}; TaxID=309803 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 /
SCNpilot_BF_INOC_scaffold_0_534
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

589477..589899
DNA (423bp) protein (141aa)
Xylan 1 4-beta-xylosidase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RM64_9CLOT
Xylan 1 4-beta-xylosidase {ECO:0000313|EMBL:CCZ42345.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridi
xylan 1,4-beta-xylosidase
SCNpilot_BF_INOC_scaffold_0_535
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

590017..591111
DNA (1095bp) protein (365aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EIT0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI94532.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.
ABC transporter
SCNpilot_BF_INOC_scaffold_0_536
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

591270..592184
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EJJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97499.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
transcriptional regulator CdaR
SCNpilot_BF_INOC_scaffold_0_537
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

592234..593649
DNA (1416bp) protein (472aa)
lacG; 6-phospho-beta-galactosidase (EC:3.2.1.85) Tax=GWF2_Firmicutes_51_9_curated
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosid ase (EC:3.2.1.21)
Phospho-beta-glucosidase id=3746076 bin=GWF2_Firmicute_51_9 species=Fusobacterium mortiferum genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_Firmicute_51_9 organism_group=Firmicute
SCNpilot_BF_INOC_scaffold_0_538
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

593650..594561
DNA (912bp) protein (304aa)
Transcriptional regulator n=1 Tax=Clostridium intestinale URNW RepID=U2PQR7_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:ERK28785.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
transcriptional regulator
SCNpilot_BF_INOC_scaffold_0_539
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

594652..595695
DNA (1044bp) protein (348aa)
Transcriptional regulator (LacI family) n=2 Tax=Eubacterium rectale RepID=C4ZGN8_EUBR3
transcriptional regulator (LacI family)
Transcriptional regulator (LacI family) {ECO:0000313|EMBL:ACR74835.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale
SCNpilot_BF_INOC_scaffold_0_540
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(595773..596759)
DNA (987bp) protein (329aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=748449 species="Bacteria; Firmicutes; Clost
Aldose 1-epimerase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K9Q2_HALHC
galactose mutarotase-like enzyme
Displaying items 511-540 of 619 in total

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