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SCNpilot_BF_INOC_scaffold_0

Search features with annotation key words

Displaying items 121-150 of 619 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_0_121
Geobacillus kaustophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(142865..143533)
DNA (669bp) protein (223aa)
ung; uracil-DNA glycosylase (EC:3.2.2.27)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBas
Uracil-DNA glycosylase n=7 Tax=Geobacillus RepID=C9RWU8_GEOSY
SCNpilot_BF_INOC_scaffold_0_122
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

143678..144535
DNA (858bp) protein (286aa)
Transcriptional regulator, AraC family n=1 Tax=Caloramator australicus RC3 RepID=I7KUA7_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCJ33468.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australi
transcriptional regulator
SCNpilot_BF_INOC_scaffold_0_123
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

144616..145293
DNA (678bp) protein (226aa)
Transcriptional regulator n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I6Q9_9CLOT
Two-component system transcriptional regulator
Tax=BJP_08E140C01_Clostridiales_46_19
SCNpilot_BF_INOC_scaffold_0_124
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

145301..146737
DNA (1437bp) protein (479aa)
Signal transduction histidine kinase n=1 Tax=Bacillus sp. 1NLA3E RepID=N0ALU4_9BACI
signal transduction histidine kinase
Tax=BJP_IG2069_Clostridiales_42_11
SCNpilot_BF_INOC_scaffold_0_125
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

147015..147713
DNA (699bp) protein (233aa)
GntR domain protein id=3140608 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
fatty acid metabolism transcriptional regulator FadR
Tax=BJP_IG2069_Spirochaetales_48_31
SCNpilot_BF_INOC_scaffold_0_126
Mollicutes bacterium HR1, Mollicutes, Tenericutes, Bacteria

Not on your lists

147731..149101
DNA (1371bp) protein (457aa)
C4-dicarboxylate anaerobic carrier n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BGZ7_PETMO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIO18866.1}; TaxID=1541959 species="Bacteria; Tenericutes; Mollicutes.;" source="Mollicutes bacterium HR1.;"
SCNpilot_BF_INOC_scaffold_0_127
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

149110..149832
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N4P7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS78023.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
membrane protein
SCNpilot_BF_INOC_scaffold_0_128
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

149845..150558
DNA (714bp) protein (238aa)
Putative membrane protein n=1 Tax=Clostridium sp. D5 RepID=F0YX57_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EGB93545.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
membrane protein
SCNpilot_BF_INOC_scaffold_0_129
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

150574..151920
DNA (1347bp) protein (449aa)
hypothetical protein; K13049 carboxypeptidase PM20D1 [EC:3.4.17.-] Tax=GWB1_Spirochaetes_60_80_curated
Peptidase, M20E (Gly-X carboxypeptidase) subfamily id=3438346 bin=GWB1_Spirochaetales_60_80 species=Clostridium sp. D5 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
hypothetical protein
SCNpilot_BF_INOC_scaffold_0_130
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

151962..152582
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1YQK6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ92825.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_0_131
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


153036..154496
DNA (1461bp) protein (487aa)
aspS3; aspartate--tRNA ligase AspS (EC:6.1.1.12)
aspartyl-tRNA synthetase n=1 Tax=Clostridium tunisiense RepID=UPI00031E1BEE
Aspartyl-tRNA synthetase, archaeal type {ECO:0000313|EMBL:EKQ54543.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Ma
SCNpilot_BF_INOC_scaffold_0_132
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(154639..155331)
DNA (693bp) protein (231aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostrid
ABC transporter related n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SRP3_CLOC7
ABC transporter
SCNpilot_BF_INOC_scaffold_0_133
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(155324..156490)
DNA (1167bp) protein (389aa)
Permease n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7IAF9_9CLOT
Permease {ECO:0000313|EMBL:ETA82329.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
permease
SCNpilot_BF_INOC_scaffold_0_134
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(156487..157149)
DNA (663bp) protein (221aa)
Cobalamin binding protein-like protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GCI8_9FIRM
Cobalamin binding protein-like protein {ECO:0000313|EMBL:EEG78923.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter a
cobalamin B12-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_0_135
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157316..157576
DNA (261bp) protein (87aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1216980 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; A
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Aeromonas salmonicida subsp. pectinolytica 34mel RepID=T0QW68_AERSA
SCNpilot_BF_INOC_scaffold_0_136
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

157609..158415
DNA (807bp) protein (269aa)
ATPase involved in chromosome partitioning n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LZ70_CLOCD
ATP-binding protein {ECO:0000313|EMBL:KJF27398.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
chromosome partitioning ATPase
SCNpilot_BF_INOC_scaffold_0_137
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(158675..159955)
DNA (1281bp) protein (427aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
Signal transduction histidine kinase n=1 Tax=Clostridium sp. BNL1100 RepID=H2JA71_9CLOT
signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_0_138
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(159955..160632)
DNA (678bp) protein (226aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TPN8_ALKMQ
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABR48156.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" sourc
SCNpilot_BF_INOC_scaffold_0_139
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

160824..161660
DNA (837bp) protein (279aa)
VTC domain-containing protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2JA69_9CLOT
VTC domain-containing protein
VTC domain-containing protein {ECO:0000313|EMBL:AEY67301.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
SCNpilot_BF_INOC_scaffold_0_140
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

161618..162304
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2PRY6_9CLOT
Cell division protein FtsZ {ECO:0000313|EMBL:KGK87711.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_0_141
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

162342..163982
DNA (1641bp) protein (547aa)
Spore coat protein CotH n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LR20_TEPAE
spore coat protein CotH rbh
Spore coat protein CotH {ECO:0000313|EMBL:CCP27036.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaer
SCNpilot_BF_INOC_scaffold_0_142
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

164075..164812
DNA (738bp) protein (246aa)
Uncharacterized protein n=6 Tax=Clostridium thermocellum RepID=E6UTB0_CLOTL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN53404.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (st
SCNpilot_BF_INOC_scaffold_0_143
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

164856..165302
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium sp. DL-VIII RepID=G7M6G3_9CLOT
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AIF52982.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UF
SCNpilot_BF_INOC_scaffold_0_144
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

165335..165664
DNA (330bp) protein (110aa)
Thioredoxin n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RPT5_9CLOT
Thioredoxin {ECO:0000313|EMBL:CDF57386.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
thioredoxin domain-containing protein
SCNpilot_BF_INOC_scaffold_0_145
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

165795..166682
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98781.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
radical SAM superfamily protein
SCNpilot_BF_INOC_scaffold_0_146
Paenibacillus sp. FSL H7-0357, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

166770..167417
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) RepID=C0ZDC0_BREBN
S-layer protein
S-layer protein {ECO:0000313|EMBL:AIQ21123.1}; TaxID=1536774 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0357.;"
SCNpilot_BF_INOC_scaffold_0_147
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

167645..168187
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Succinispira mobilis RepID=UPI000361B957
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI95820.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
SCNpilot_BF_INOC_scaffold_0_148
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

168203..168631
DNA (429bp) protein (143aa)
Flavodoxin n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PXY8_9BACT
Flavodoxin {ECO:0000313|EMBL:EHL65407.1}; TaxID=457415 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes sp. 3_1_syn1.;"
flavodoxin
SCNpilot_BF_INOC_scaffold_0_149
unknown

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168716..168949
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_0_150
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(169137..169940)
DNA (804bp) protein (268aa)
Lipoprotein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PSB6_CLOSD
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
metQ; DL-methionine transporter subunit ; periplasmic-binding component of ABC superfamily
Displaying items 121-150 of 619 in total

View Taxonomy