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SCNpilot_BF_INOC_scaffold_1252_7

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 3912..7601

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 999.99
  • Bit_score: 1793
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 999.99
  • Bit_score: 1790
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=RPOB_ALKMQ similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 999.99
  • Bit_score: 1790
  • Evalue 0.0

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Taxonomy

Clostridium aceticum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3690
ATGCCACAACCTGTAATGCTCGGAAAAACAGAAAGAATGAGTTTTGCCAGAATCAATGAGCTACTTGAGAAGCCAAACCTAATTGAGATTCAAAGAAAATCTTATGAGTGGTTTCTTGAAGAAGGTCTAAAAGAGGCCTTTAAGGACATTTCGCCAATCGAAGATTACACAGGAAATCTTAGCTTGGAATTCATTGATTATGAACTCGATGAAGAACCAAAGTATGATGTTGAAGAGTGTAAAGAACGAGATGTTAACTTCGCCGTTCCTTTAAGAGTGCAAGTTCGCTTTATTAATAAGGAAACTAGCGAAATCAAAGAACAAAAAGTATTTATGGGTGATTTCCCATTGATGACTGACAAAGGTACTTTTATCATCAATGGTGCTGAGAGAGTAATTGTCAGCCAATTGGTTAGATCACCAGGGCCATACTACGATGTAAAAATCGATAAGGTTGGTACCAGATTATTTTCAAGTACAATTATACCTAACAGAGGCGCATGGCTTGAATATGAAACTGATTCAAACGATGTTGTGTCGGTGAGAATTGACAGAACTCGTAAATTGCCGGCTACGACTTTAATCAGAGCTTTAGGCTACCATACGAATCAAGAAATCCTTTCAATGTTTGGTGAAGATGAAAAGCTGATCAAGACGTTGGATAAGGACAGCACTGTTAACCAAGAAGAAGGTCTTATTGAAATTTATAAAAAATTAAGACCAGGTGAACCGCCTACTGTAGAAAGTGCAAGAAACCTAATCTATTCTTTATTCTTTGATGAAAAGCGTTATGACCTTGCAAAAGTGGGTCGTTATAAATTCAATAGAAAACTTGGTGTTTCTAACCGAATTGAAGAGCGTATATCTGCAGAGAATATTATTAATCCGCAGACAGGTGAAATCCTTGTAGAAAAAGATACAAAAATTTCAATTGAAATGGCAACTGTCATTGAAAATGCAGGTGTTAAACAAGTTGATATCTATGGTGATGACGAGAAGATTATTCGCGTTATTGGTAACCATTTTGTTGACATTAACACATACATTAAATCTGAAAAACTTAAAATCAAGGAAAAAGTATATTATCCAGTTTTAAAAGAAATCATGGATACACATGACACTGTAGAAGATCAGTTGAATGCTATCGAGGAAAGAATGTCTGAGCTTATTCCTAGACACATTATTCCAGCGGACATGATTGCTTCTTTCAGCTATATCCTCAACTTAAATTGGGGTGTTGGTAATGTGGATGATATCGACCATTTAGGTAACAGAAGAATTCGTTCGGTGGGCGAGCTTCTTCAAAACCAATTTAGAATTGGTCTTTCAAGAATGGAAAGAGTGGTTCGTGAACGTATGACCATCCAAGATATGGAAGCGATTACGCCACAAGCGCTTATTAATATTAAACCGGTTGTATCTGCAATTAAAGAGTTTTTCGGTAGTTCTCAGTTATCTCAGTTCATGGATCAAACGAATCCGCTTGCTGAGTTAACACATAAGAGAAGACTTTCAGCTCTTGGACCAGGTGGTCTTTCGAGAGAAAGAGCTGGCTTCGAGGTTCGTGACGTTCACCATTCTCACTATGGTAGAATGTGTCCTATCGAGACACCGGAAGGTCCAAATATCGGTCTAATTGGTTCTCTAAGTACATTTGCTAGAATCAATGAGTACGGATTTATTGAGTCACCTTATAGAAAAGTAGATAAGAAGACCGGCATTATTACTGATGAAATAATTTATATCACTGCTGATTATGAAGATAAATATACAGTTGCGCCTGCAAATGAGCCAATAACAGAAGACAATCGCTTTGTTAGCGATAGAATTGTTGCGCGTCGTAGAGCAGATATTAAAGAGTTCCCTTCTACTGAAATTGATTTGGTTGAAGTCTCCGCTCAACAAATGGTTTCTGTAGCTACTGCAATGATTCCATTCCTTGAGAACGACGATGCTAACCGTGCCCTAATGGGTTCGAACATGCAACGTCAGGCAGTTCCACTCGTAAGAGCTGAAGCGCCAATCATCGGGACTGGAATAGAACACATTGCTGCAAAAGATTCAGGATCAGTTGTTAAATCACCAGTCGATGGTGTGATTGAGTACGTTTCAGCAGAGGAAATCGTAGTAAGAGGCGACGCAGACAAGAAAAAGTATAGATTCAAATTGTTAAAATTCAAGCGTTCAAATCAAGGTACTTGTATCAATCAAAAGCCATTGGTTAAAAAAGGTCAACGTGTAATTGCGGATGAAATTATCGCAGACGGCCCTTCTACAGATAATGGTGAGATTGCATTAGGTACAAACCTGTTAATCGGTTTCATGACTTGGGAAGGCTATAACTATGAGGATGCGATCCTTATAAGTGAAGAGCTAGTTATGGAAGACAAGCTTTCTTCTATTCATATCGAAGAGTATGAATCAGAAGCGAGAGATACTAAACTTGGACCAGAAGAGATTACAAGAGACATTCCAAACGTTGGCGAAGATGCTCTTAAAAACCTCGATGCTGAAGGAATTATCAGAATCGGAGCAGAGGTTAACTCTGGGGACATTTTAGTAGGTAAAGTAACGCCAAAAGGCGAAACTGAATTAACTGCTGAAGAAAGATTGCTTAGAGCAATTTTCGGTGAAAAAGCGCGTGAAGTTAGAGACACTTCGTTGAGAGTACCTCACGGTGAGTCAGGTATAATAGTTGATGTTAAAAAATTCGAAAGAGAAAATGGTGATGAATTATCGCCAGGTGTTAACAAACTCATTCGTGTGTACATTGCTAAGAAAAGAAAGATTAGTATCGGTGATAAAATGGCTGGTCGTCATGGTAATAAAGGGGTTATTTCCAGAATTTCTCCAGTAGAAGACATGCCTTTCCTCGAAGATGGAACACCATTACAAATCGTTCTTAACCCATTAGGGGTACCTTCGCGTATGAATATTGGACAGGTGCTTGAAGTCCACCTTGGCTTAGCAGCTAAGAAAAAGGGATGGAAAGTCGCAACCCCAGTATTCGACGGTGCTAGAGAGACTCAAATCAGAGAAATCTTACAGGATGCTGGTTACCCAGGTAACGGTAGACTTTTAATAAGAGATGGTAGAACTGGTGAAGCATTTGATAACCACGTAACGGTTGGTTATATGTACATGCTTAAACTTCACCACTTGGTTGATGATAAAATCCATGCTAGAAGTACAGGACCTTATTCTCTTGTAACGCAACAACCACTTGGCGGTAAAGCTCAATTTGGTGGGCAACGTTTTGGTGAGATGGAGGTTTGGGCACTTGAGGCTTATGGTGCTGCTCATACACTACAAGAGATATTAACGGTTAAATCCGATGACGTCGTAGGTAGAGTAAAAGCATATGAAGCAATTGTTAAAGGTGAAAATATTCCAGAACCAGGTATTCCTGAATCGTTTAAAGTATTAATCAAAGAGCTTCAAGCGCTTGCGCTTGATGTAAAGGTTCTTAGAGATGATGCCGGCGAAATCGAAATTGAAGTCGATGTAGATGACGATGATGGCTTAGATTACAATACCGCTCTTAAAGAAAATAAGATTACAAATGATATTGAGCGTGGCGGATTTATTGATGATTTATCAGAAGAAGAGTCTAATCAAGAAGTTGAGGATGACAATTTTGATTCAGATGATGATTATTTAATGGATGACGATGAAGATTTTGATGAGTAA
PROTEIN sequence
Length: 1230
MPQPVMLGKTERMSFARINELLEKPNLIEIQRKSYEWFLEEGLKEAFKDISPIEDYTGNLSLEFIDYELDEEPKYDVEECKERDVNFAVPLRVQVRFINKETSEIKEQKVFMGDFPLMTDKGTFIINGAERVIVSQLVRSPGPYYDVKIDKVGTRLFSSTIIPNRGAWLEYETDSNDVVSVRIDRTRKLPATTLIRALGYHTNQEILSMFGEDEKLIKTLDKDSTVNQEEGLIEIYKKLRPGEPPTVESARNLIYSLFFDEKRYDLAKVGRYKFNRKLGVSNRIEERISAENIINPQTGEILVEKDTKISIEMATVIENAGVKQVDIYGDDEKIIRVIGNHFVDINTYIKSEKLKIKEKVYYPVLKEIMDTHDTVEDQLNAIEERMSELIPRHIIPADMIASFSYILNLNWGVGNVDDIDHLGNRRIRSVGELLQNQFRIGLSRMERVVRERMTIQDMEAITPQALINIKPVVSAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLIGSLSTFARINEYGFIESPYRKVDKKTGIITDEIIYITADYEDKYTVAPANEPITEDNRFVSDRIVARRRADIKEFPSTEIDLVEVSAQQMVSVATAMIPFLENDDANRALMGSNMQRQAVPLVRAEAPIIGTGIEHIAAKDSGSVVKSPVDGVIEYVSAEEIVVRGDADKKKYRFKLLKFKRSNQGTCINQKPLVKKGQRVIADEIIADGPSTDNGEIALGTNLLIGFMTWEGYNYEDAILISEELVMEDKLSSIHIEEYESEARDTKLGPEEITRDIPNVGEDALKNLDAEGIIRIGAEVNSGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRVPHGESGIIVDVKKFERENGDELSPGVNKLIRVYIAKKRKISIGDKMAGRHGNKGVISRISPVEDMPFLEDGTPLQIVLNPLGVPSRMNIGQVLEVHLGLAAKKKGWKVATPVFDGARETQIREILQDAGYPGNGRLLIRDGRTGEAFDNHVTVGYMYMLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEILTVKSDDVVGRVKAYEAIVKGENIPEPGIPESFKVLIKELQALALDVKVLRDDAGEIEIEVDVDDDDGLDYNTALKENKITNDIERGGFIDDLSEEESNQEVEDDNFDSDDDYLMDDDEDFDE*