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SCNpilot_BF_INOC_scaffold_17_25

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 29832..30284

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 149.0
  • Bit_score: 202
  • Evalue 3.60e-49
Peptide deformylase n=51 Tax=Clostridium difficile RepID=G6BXR9_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 149.0
  • Bit_score: 205
  • Evalue 3.90e-50
def1; peptide deformylase 1 similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 149.0
  • Bit_score: 202
  • Evalue 7.10e-50

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 453
TTGGCGCTTAGAAAAATTAAACAGTTTGACGATGTATTTTTAAGTAAAGTAAGCAAACCGATCGAAGAAGTGGATGATCGCATCAGAGAAATCTTGGATGATATGGTGGAGACCATGTATCATGAGCCGAATGGTGGTGGACTGGCTGCGGTTCAAGTGGGCATACTCAAAAGACTGGTTGTCGCTGACATGGGTACGGGACTTTATAAGCTGGTTAATCCAGTAATTGTTGAAAAAATTGGAGAGCAGACGGTTGTTGAAGGCTGTTTAAGCTATCCAGGTGTTTGGGGTAGAGTCAAACGACCATTGAAGGTTGTTGTTGAAGCATTAGATGAGTATGGAAAACCACAGCGTATAGAAGCTGTTGGCGCTCTCGCAAAGTGCTTTTGTCATGAAATTGATCATTTAGATGGCATTGTTTTTAAAGAAAAAGTGTTTGAGTATATCGATTAG
PROTEIN sequence
Length: 151
LALRKIKQFDDVFLSKVSKPIEEVDDRIREILDDMVETMYHEPNGGGLAAVQVGILKRLVVADMGTGLYKLVNPVIVEKIGEQTVVEGCLSYPGVWGRVKRPLKVVVEALDEYGKPQRIEAVGALAKCFCHEIDHLDGIVFKEKVFEYID*