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SCNpilot_BF_INOC_scaffold_17_29

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 33740..34363

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory s, tetR family protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0E5P5_CLOSO similarity UNIREF
DB: UNIREF100
  • Identity: 34.8
  • Coverage: 204.0
  • Bit_score: 123
  • Evalue 2.10e-25
TetR family transcriptional regulator {ECO:0000313|EMBL:KGK82246.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP2 similarity UNIPROT
DB: UniProtKB
  • Identity: 36.3
  • Coverage: 204.0
  • Bit_score: 127
  • Evalue 2.60e-26
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 207.0
  • Bit_score: 115
  • Evalue 1.60e-23

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Taxonomy

Clostridium sp. HMP27 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 624
TTGGATCATTTAAGAGAAACGTATTGTAAATTCTTTGCATTGTCATATGAGAAGCGGACTTTGATCATTAACGCTGGAATTGAAGAGTTTGTTCGTGGCGGATACGATAAAGCCTCGGTGAATGCGATTGTTGAAGCTGCTGGCATATCGAAAGGATCATTGTTTTTTTATTTTGAGTCTAAGAAAAAGCTCTACCTTTTTTTATTTGAATATTGTGAGTACTTAATCATTGAAAATGCACGAAAAAGCATGCATTTTGTCGAAGGTGACTTTATAGCAAGAATGCAGGTAACCATGCATCAAAATCTAACCTTACTAGAAACGCATCCTAGGATTTTTGCCTTTGTAAAAGCGTGCAAGAACGAAAACGATGAAAATATTAAAGCGTTAATTGAGGATATCGTAAAGGATGCAGATGAAAAAATACTTGCACATGACTATCATCAGATTGATAAGACACTTTTCCGAGATGAAAATGAAATTGAAATGGCGATTGCAACGATAAAAGCGACCTTATTTAATGTTACTCATAGCTGCTTATCAAATTCGTCCATGACCCTTTATGATGCGAATAATGAAATAGATCGTTATATCCATTTTTTTAGAAAACACTTTTATAAGTAG
PROTEIN sequence
Length: 208
LDHLRETYCKFFALSYEKRTLIINAGIEEFVRGGYDKASVNAIVEAAGISKGSLFFYFESKKKLYLFLFEYCEYLIIENARKSMHFVEGDFIARMQVTMHQNLTLLETHPRIFAFVKACKNENDENIKALIEDIVKDADEKILAHDYHQIDKTLFRDENEIEMAIATIKATLFNVTHSCLSNSSMTLYDANNEIDRYIHFFRKHFYK*