ggKbase home page

SCNpilot_BF_INOC_scaffold_17_166

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 173636..174124

Top 3 Functional Annotations

Value Algorithm Source
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 159.0
  • Bit_score: 195
  • Evalue 4.70e-47
S-ribosylhomocysteine lyase n=1 Tax=Prevotella baroniae F0067 RepID=U2P7H4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 159.0
  • Bit_score: 195
  • Evalue 3.40e-47
LuxS protein involved in autoinducer AI2 synthesis similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 159.0
  • Bit_score: 189
  • Evalue 6.80e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Prevotella baroniae → Prevotella → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 489
ATGAATAAAATAAAAAGTTTCACAGTTGACCATATTCGGTTAAAAAAAGGGGTATATGTTTCAAGAGTTGATTATTTAGGCAATGAAGTGGTAACTACATTTGATTTACGAATGAAGCTGCCAAATAAAGAAACTCTTGAAAATGAACCAATTCATACGCTTGAGCACTTGATCGCTACCTTTGTAAGGAATGATGTTGAATTCGCTGATAAAGTGGTGTATTTTGGACCGATGGGTTGTTTAACCGGTATGTATCTAATCTTGCATGGTGAATATACCTCTGAGGCAGTTTTGCCATTATTGAAAAGAGCCTTTGATTTCGCAGCTCAATATGAAGGAGATATTCCAGGTGTAAGCGAGATCGAATGCGGTACCTATAAGCTTCACAGCTTAACCAAAGCAAAGGTTGAGGCCAGTGATTATTTGGAGGTTTTAAACCAAATACAACCAGACCAACTGGTGTATCCTGAAAAAAAGACGAGGAGTTAG
PROTEIN sequence
Length: 163
MNKIKSFTVDHIRLKKGVYVSRVDYLGNEVVTTFDLRMKLPNKETLENEPIHTLEHLIATFVRNDVEFADKVVYFGPMGCLTGMYLILHGEYTSEAVLPLLKRAFDFAAQYEGDIPGVSEIECGTYKLHSLTKAKVEASDYLEVLNQIQPDQLVYPEKKTRS*