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SCNpilot_BF_INOC_scaffold_17_276

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 298381..299121

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pep similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 247.0
  • Bit_score: 184
  • Evalue 1.60e-43
rsmE2; ribosomal RNA small subunit methyltransferase E (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 251.0
  • Bit_score: 175
  • Evalue 1.50e-41
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VMD1_CLOBI similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 246.0
  • Bit_score: 184
  • Evalue 1.20e-43

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Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 741
ATGCATCGTTTTTTTTTAGAATCAGAAGATAGGATTAGTAGCAATGAGGTTATACTTAACAACGAAGAGAGTGTAACCCATTTAATTAAGGTTTTAAGAGCTAAGAATGGTGAGTCTATAGAGCTTATTTCAGAGACAGATCTCATAATAGCTAAAATAAATGTGATGAATACTAATTCTGTTAGTTTAATAATTGAAAGCATACAGACTTTATCTAATGAGTCAGCAGTTCAAGTAGACCTTTTTCAATGCTTGCCCAAAGGCCCAAAGCTAGAGCTGATTTTACAAAAAAATGTTGAACTAGGCATTCACGACTTTTACCTGGTTCAATCAAAACGATGTATTGTTGATTATAAGCCTAAGGATGTGCCTAAAAAGCTTGAACGACTAGAACGTGTGATTAAAGAGGCTGCTAAGCAATCAAAGAGAGAAAGAATTCCAAGCCTGCATGGCATTATGAAAATTAGTGAGATTGAAGAGGTGATTACGAGTTACGATGCTTTTTTTATCTTATATGAAAAAGAAAAAAACGCTTCTTTAAAGCAACACATGCAGACTTTTACTGGTAAAAGAATTGCAATTTTAGTAGGTCCTGAAGGTGGATTTGAAGCATCTGAGGTCGAGAGGATAGTTATGGCTGGCGCCAAATCAGTTACACTTGGAAGCCGTATATTACGTACAGAAACCGCTGGATTTGTTGCGACAACATGTATCCAATATGAAATCGGCGAGTTAGATTAA
PROTEIN sequence
Length: 247
MHRFFLESEDRISSNEVILNNEESVTHLIKVLRAKNGESIELISETDLIIAKINVMNTNSVSLIIESIQTLSNESAVQVDLFQCLPKGPKLELILQKNVELGIHDFYLVQSKRCIVDYKPKDVPKKLERLERVIKEAAKQSKRERIPSLHGIMKISEIEEVITSYDAFFILYEKEKNASLKQHMQTFTGKRIAILVGPEGGFEASEVERIVMAGAKSVTLGSRILRTETAGFVATTCIQYEIGELD*