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SCNpilot_BF_INOC_scaffold_17_297

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 322067..323299

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0E266_CLOSO similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 412.0
  • Bit_score: 542
  • Evalue 2.80e-151
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 398.0
  • Bit_score: 542
  • Evalue 6.80e-151
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 414.0
  • Bit_score: 520
  • Evalue 5.50e-145

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Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1233
TTGAGCGAAAAATTGAATGCCAAAAACCAAGAATTAGTAAAAGCACTTATTAAAAAGGGAAAGAAAAATGGTAGCTTATCCTACAAAGAGATACAAGACAAGCTTTCAGAACTTGAAATCGATAAAGATCAAATCGAAGAAATTTACGAAGCGTTTAGTGCTATGGATATTACTATCATTTCTGACGACGATGAGGATGAAGACAGCTCTGATCAGGATGACGATATAGATGATATAGATCTTGATGATTTAGAAGAAATCGAAGATTTAGATGATTTAGATGATTTAGATGATCTTGATGATTTAGATGATCTCGATGATATAGATAATTTAGACGAAGATGAATCCGATGAGGACGAAGACGACGAGGATAAGGCAATCGATATTTCTGTGCCAAAAGGTATCAATATCGATGACCCAGTTCGTATGTATTTGAAAGAAATTGGAGAGGTGGCACTATTATCAGGCGATGAAGAGGTTGAACTCGCAAAACGCATGGCAAATGGCGATGAAGATGCTAAGAAGAAGCTTTGTGAAGCGAATCTTCGACTTGTAGTAAGTATCGCTAAAAAATATGTTGGTAGAGGAATGCTTTTCCTTGACTTAATTCAAGAGGGTAATTTGGGCCTTATCAAAGCAGTTGAAAAATTTGACTGGACGAAAGGGTTTAAGTTTTCAACCTATGCAACCTGGTGGATCAGACAAGCGATTACACGTGCAATAGCAGACCAAGCAAGAACCATTCGTATTCCTGTCCACATGGTTGAGACCATCAATAAATTAATTCGCGTTCAAAGACAACTCCTACAAGAGTATGGTCGTGAACCACTTCCAGAAGAGATTGCAAAGGAAATGGACATGACAGTAGAAAAGGTAAGAGAGATTTTAAAAATTGCTCAAGAGCCAGTATCTTTGGAAACACCAATAGGTGAGGAAGAGGATTCACATCTTGGTGACTTTATTCCGGATAATGACGCACCAGCGCCTGCTGATGCTGCGGCGTTTTCTATGCTAAAGGAACAATTAATGGAGGTACTTGAAACGTTAACGCCTAGAGAACAAAAAGTTCTTAAGCTACGATTTGGGCTTGAGGATGGTAGAGCGCGTACACTTGAAGAGGTGGGCAAAGAATTCGATGTAACACGTGAAAGAATAAGACAAATCGAAGCAAAAGCTCTTAGAAAGCTTAAGCATCCAAGTAGAAGTAAAAAACTCAAAGATTATTTAGAATAG
PROTEIN sequence
Length: 411
LSEKLNAKNQELVKALIKKGKKNGSLSYKEIQDKLSELEIDKDQIEEIYEAFSAMDITIISDDDEDEDSSDQDDDIDDIDLDDLEEIEDLDDLDDLDDLDDLDDLDDIDNLDEDESDEDEDDEDKAIDISVPKGINIDDPVRMYLKEIGEVALLSGDEEVELAKRMANGDEDAKKKLCEANLRLVVSIAKKYVGRGMLFLDLIQEGNLGLIKAVEKFDWTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQEYGREPLPEEIAKEMDMTVEKVREILKIAQEPVSLETPIGEEEDSHLGDFIPDNDAPAPADAAAFSMLKEQLMEVLETLTPREQKVLKLRFGLEDGRARTLEEVGKEFDVTRERIRQIEAKALRKLKHPSRSKKLKDYLE*