ggKbase home page

SCNpilot_BF_INOC_scaffold_539_9

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 3947..4708

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=RS3_ALKOO similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 238.0
  • Bit_score: 332
  • Evalue 4.70e-88
30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 238.0
  • Bit_score: 332
  • Evalue 1.30e-88
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (stra similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 238.0
  • Bit_score: 332
  • Evalue 6.50e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alkaliphilus oremlandii → Alkaliphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 762
ATGGGTCAAAAAGTTAGCCCACACGGACTTCGAGTTGGAGTCATTAAAGATTGGGACTCAAAATGGTATGCAAATAAAAAGAACTTCGCTGATCTTTTAATTGAAGATCATGAAATTCGCAAATATGTTAAAAAGAGACTTTTTACAGCTGGCGTTTCTAGAGTATATATCGATAGAACAGCTAATGATAAAGTTCACGTAAACATCTTTACTGCTAAACCAGGTATGGTTGTTGGTAAAGGTGGCGAAAACATTAAAGTTCTTAGAGAAGAGCTTGAAAAAATCACTAAAAAATCTATTCAACTTGATATCTCTGAAGTAGATAATGTTGATGTTGATGCGCAACTCGTTGCTGAAAACGTTGCGTTCTCATTAGAGAAAAGGGTTTCTTTCAGAAGAGCAATGAAACAAGTTATCGGCAGAGCGCTTAAATCAGGTGCTGAAGGTATCAAAGTTCAAACTTCTGGTCGTTTAGGCGGCGCTGAAATGGCAAGAACTGAAGGCTATTCAGAAGGTAACGTGCCACTCTCTACATTAAGAGCAGATATCGATTACGGATTTGCTGAAGCAGATACAACTTATGGTAAAATTGGTGTTAAAGTTTGGATCAATAAAGGCGAGGTTCTTCCAAGTGTAAGTGAAGAAACTAGACTTAGAAGAAAAGAAGCTAGAAAAGTTTCTGATAAACGCCCTCAAAAGCAAAGAAACGCTAGTGCTGGTTCAGGCAAAGGCCCAAGAAAGCCTAGAAATAACAATAATTAA
PROTEIN sequence
Length: 254
MGQKVSPHGLRVGVIKDWDSKWYANKKNFADLLIEDHEIRKYVKKRLFTAGVSRVYIDRTANDKVHVNIFTAKPGMVVGKGGENIKVLREELEKITKKSIQLDISEVDNVDVDAQLVAENVAFSLEKRVSFRRAMKQVIGRALKSGAEGIKVQTSGRLGGAEMARTEGYSEGNVPLSTLRADIDYGFAEADTTYGKIGVKVWINKGEVLPSVSEETRLRRKEARKVSDKRPQKQRNASAGSGKGPRKPRNNNN*