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SCNpilot_BF_INOC_scaffold_539_12

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 5384..5638

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S17 n=196 Tax=Clostridium difficile RepID=RS17_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 84.0
  • Bit_score: 145
  • Evalue 2.10e-32
rpsQ; 30S ribosomal protein S17 similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 84.0
  • Bit_score: 148
  • Evalue 1.20e-33
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 84.0
  • Bit_score: 148
  • Evalue 5.80e-33

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Taxonomy

Eubacterium acidaminophilum → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 255
GTGGAAAGAGGCAGTAGAAAAGTTAGAGTTGGATTCGTAACTAGTGATAAAATGGACAAGACAATCGTTGTTTCTGTAGAAGAGTTTATCCGTCATCCACTCTACGGTAAAAGAGTAAAAAGAACAAAAAAATTCAAAGCACATGATGAAGAAAATGCATGTGGCATTGGCGATAGAGTAAGAATTATGGAAACTAGACCACTTAGCAGAGATAAAAGATGGAGACTAGTTGAAATCGTGGAAAAAGCTAAGTAG
PROTEIN sequence
Length: 85
VERGSRKVRVGFVTSDKMDKTIVVSVEEFIRHPLYGKRVKRTKKFKAHDEENACGIGDRVRIMETRPLSRDKRWRLVEIVEKAK*