ggKbase home page

SCNpilot_BF_INOC_scaffold_539_18

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 7573..8118

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PTU9_CLOSD similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 180.0
  • Bit_score: 261
  • Evalue 7.30e-67
rplF; 50S ribosomal subunit protein L6 similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 180.0
  • Bit_score: 261
  • Evalue 2.00e-67
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 180.0
  • Bit_score: 261
  • Evalue 1.00e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] sticklandii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 546
ATGTCAAGAGTAGGTAAATTGCCTATTACAATACCTCAAGGGGTCGAAGTTAAAATTACTGCTACTAATTTAGTAACTGTAAAAGGACCTCTAGGAGAATTGTCAGAGCAAATAGACAAAGACATTAACATTAACATTGAAGACGGTACATTAACTGTAACTCGTCCATCAGATAATAAAAGACACAGAGCTTTACATGGCTTGACAAGAGCTTTAATCAACAATATGGTTATCGGCGTTACTCAAGGATTTGAGAGAAAACTTTTAATCGTAGGCGTTGGTTACAAAGCTGCTAAAAATGGTAACAAACTTGATTTATCTTTAGGTCATTCTCATCCAGTAGTGATGGAAGATCCAGAAGGTATCACAACTGTAGTTAATACACCTACTGAGATTGTCGTAAAAGGCATCAATAAGCAACTTGTTGGTAACTACGCTTCTAAAATTAGAGAGTGGAGAAAACCAGAGCCTTATAAAGGTAAAGGTGTTCGCTTCGCTGATGAGTTTGTCATCAGAAAAGAAGGAAAAACAGGTAAGAAAAAATAA
PROTEIN sequence
Length: 182
MSRVGKLPITIPQGVEVKITATNLVTVKGPLGELSEQIDKDININIEDGTLTVTRPSDNKRHRALHGLTRALINNMVIGVTQGFERKLLIVGVGYKAAKNGNKLDLSLGHSHPVVMEDPEGITTVVNTPTEIVVKGINKQLVGNYASKIREWRKPEPYKGKGVRFADEFVIRKEGKTGKKK*