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SCNpilot_BF_INOC_scaffold_60_15

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: comp(12026..12268)

Top 3 Functional Annotations

Value Algorithm Source
Transcription regulator n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AVA2_CLOA9 similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 78.0
  • Bit_score: 133
  • Evalue 1.00e-28
abrB1; transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 78.0
  • Bit_score: 133
  • Evalue 2.80e-29
Transcription regulator {ECO:0000313|EMBL:AFS77199.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 78.0
  • Bit_score: 133
  • Evalue 1.40e-28

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Taxonomy

Gottschalkia acidurici → Gottschalkia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 243
ATGAAATCGACAGGAATTGTAAGAAAAGTCGATGAGCTAGGTAGAGTGGTTATTCCTATCGAGCTTAGAAGAACACTCACTATCGGTGAAAAGGATGCACTTGAAATTTTCACTGAAGGTGAAACGATTATCCTCAAAAAATACGAGCCAGCTTGTATTTTCTGTGGTCAGGCAAAAGGCGTTAAAAACGTTAAAGGTAAAAATATTTGCCCGGCATGTGTAGATGAGATTAAAGACTTATAG
PROTEIN sequence
Length: 81
MKSTGIVRKVDELGRVVIPIELRRTLTIGEKDALEIFTEGETIILKKYEPACIFCGQAKGVKNVKGKNICPACVDEIKDL*