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SCNpilot_BF_INOC_scaffold_60

Search features with annotation key words

Displaying items 1-30 of 185 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_60_1
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

227..916
DNA (690bp) protein (230aa)
Transcriptional regulator, GntR family n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LUI6_TEPAE
Transcriptional regulator {ECO:0000313|EMBL:KDR94202.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litora
hypothetical protein
SCNpilot_BF_INOC_scaffold_60_2
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

949..1461
DNA (513bp) protein (171aa)
3H domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MEB0_ALKOO
Transcriptional regulator {ECO:0000313|EMBL:KJF25603.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
3H domain-containing protein
SCNpilot_BF_INOC_scaffold_60_3
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1746..2771
DNA (1026bp) protein (342aa)
Phosphotransferase system, EIIC n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJ96_ALKMQ
phosphotransferase system, EIIC
Phosphotransferase system, EIIC {ECO:0000313|EMBL:ABR46264.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredige
SCNpilot_BF_INOC_scaffold_60_4
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3216..4001
DNA (786bp) protein (262aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=649755 species="Bacteria; Firmi
murI; Glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2QVA3_9FIRM
SCNpilot_BF_INOC_scaffold_60_5
unknown

Not on your lists

4003..4272
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_60_6
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4362..5549)
DNA (1188bp) protein (396aa)
aspC; aspartate aminotransferase AspC (EC:2.6.1.1)
Aspartate aminotransferase n=54 Tax=Clostridium difficile RepID=T2W3G1_CLODI
Aspartate aminotransferase {ECO:0000313|EMBL:KGG81226.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorens
SCNpilot_BF_INOC_scaffold_60_7
unknown

Not on your lists

5671..5847
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_60_8
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5849..7303
DNA (1455bp) protein (485aa)
Orn/Lys/Arg decarboxylase major region n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MEF8_ALKOO
Orn/Lys/Arg decarboxylase major region
Tax=BJP_IG2102_Clostridiales_34_350
SCNpilot_BF_INOC_scaffold_60_9
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7367..7927
DNA (561bp) protein (187aa)
Signal peptidase I precursor (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU003993, ECO:0000313|EMBL:CBH20656.1}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993, ECO:0000313|EMBL:CBH20656.1};; TaxID=499177 species="Bacteria; Firmicutes;
Signal peptidase I n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0CTH1_CLOSO
SCNpilot_BF_INOC_scaffold_60_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7983..8306
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MEG0_ALKOO
Uncharacterized protein {ECO:0000313|EMBL:KJU70574.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_60_11
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8316..9167
DNA (852bp) protein (284aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7)
AAA ATPase n=1 Tax=Clostridium sp. CAG:470 RepID=R7FFR3_9CLOT
AAA ATPase {ECO:0000313|EMBL:CDE14149.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.
SCNpilot_BF_INOC_scaffold_60_12
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9168..10076
DNA (909bp) protein (303aa)
PSP1 domain-containing protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWT4_CLOA9
PSP1 domain-containing protein
PSP1 domain-containing protein {ECO:0000313|EMBL:AFS77195.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 /
SCNpilot_BF_INOC_scaffold_60_13
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10259..11047
DNA (789bp) protein (263aa)
Methyltransferase small n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJG5_ALKMQ
methyltransferase small
Methyltransferase small {ECO:0000313|EMBL:ABR46333.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (stra
SCNpilot_BF_INOC_scaffold_60_14
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11044..11874
DNA (831bp) protein (277aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJG6_ALKMQ
uroporphyrin-III C/tetrapyrrole methyltransferase
SCNpilot_BF_INOC_scaffold_60_15
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12026..12268)
DNA (243bp) protein (81aa)
Transcription regulator n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AVA2_CLOA9
abrB1; transcriptional regulator
Transcription regulator {ECO:0000313|EMBL:AFS77199.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604
SCNpilot_BF_INOC_scaffold_60_16
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12388..12870)
DNA (483bp) protein (161aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF28488.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
SCNpilot_BF_INOC_scaffold_60_17
unknown

Not on your lists

comp(12983..13375)
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_60_18
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13921..15882
DNA (1962bp) protein (654aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MK61_ALKOO
methionyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_60_19
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16110..16943
DNA (834bp) protein (278aa)
Hydrolase, TatD family n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJI5_ALKMQ
TatD family hydrolase
Hydrolase, TatD family {ECO:0000313|EMBL:ABR46353.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strai
SCNpilot_BF_INOC_scaffold_60_20
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16969..17514
DNA (546bp) protein (182aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rul
Ribonuclease M5 n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJK8_ALKMQ
primase/topoisomerase-like protein
SCNpilot_BF_INOC_scaffold_60_21
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17521..18411
DNA (891bp) protein (297aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000255|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000255|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=RSMA_ALKOO
ksgA; dimethyladenosine transferase
SCNpilot_BF_INOC_scaffold_60_22
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

18392..18952
DNA (561bp) protein (187aa)
Putative ribosomal-protein-alanine acetyltransferase n=1 Tax=Paenibacillus sp. P22 RepID=T2LSY8_9BACL
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADO84498.1}; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain DSM
SCNpilot_BF_INOC_scaffold_60_23
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18965..19822
DNA (858bp) protein (286aa)
DegV domain-containing protein yitS n=1 Tax=Clostridium ultunense Esp RepID=M1Z4W6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGG80581.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis
degV family protein
SCNpilot_BF_INOC_scaffold_60_24
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19857..21056
DNA (1200bp) protein (400aa)
Putative metal-dependent phosphohydrolase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CPH7_9CLOT
Putative metal-dependent phosphohydrolase {ECO:0000313|EMBL:EOD00571.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalin
metal dependent phosphohydrolase
SCNpilot_BF_INOC_scaffold_60_25
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21485..22732
DNA (1248bp) protein (416aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
Tyrosine--tRNA ligase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CA78_9CLOT
tyrosyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_60_26
unknown

Not on your lists

22859..23626
DNA (768bp) protein (256aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_60_27
unknown

Not on your lists

23623..24084
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_60_28
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24434..25183
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CBB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOC99599.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
Lytic transglycosylase catalytic
SCNpilot_BF_INOC_scaffold_60_29
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25306..27693
DNA (2388bp) protein (796aa)
DNA helicase, Rad3 n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IJP9_THETR
ATP-dependent helicase {ECO:0000313|EMBL:KGK88185.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
DNA helicase, Rad3
SCNpilot_BF_INOC_scaffold_60_30
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27690..28550
DNA (861bp) protein (287aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1294142
yngB; UTP--glucose-1-phosphate uridylyltransferase YngB (EC:2.7.7.9)
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Clostridium intestinale URNW RepID=U2NK23_9CLOT
Displaying items 1-30 of 185 in total

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