ggKbase home page

SCNpilot_BF_INOC_scaffold_60_50

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 50251..50733

Top 3 Functional Annotations

Value Algorithm Source
Ligand-binding protein SH3 {ECO:0000313|EMBL:KJF25744.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 159.0
  • Bit_score: 190
  • Evalue 1.90e-45
putative small multi-drug export similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 159.0
  • Bit_score: 178
  • Evalue 1.20e-42
Small multi-drug export protein id=3789728 bin=GWC2_Clostridiales_40_7 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 141.0
  • Bit_score: 178
  • Evalue 4.20e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium aceticum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 483
ATGGACTTAATTGTAAAACTTCTAGGAATCTTATCAGCAGAATTTAAAACAGCTGTAATTGCAGCAATGCCAATCATTGAACTAAGAGGGGCTATTCCATTTGGCATCTCCTATGGTCTGTCACCTGTTCATGCGTTTGTCGTGAGCTTTTTAGGGAGCATGTTGCCAGTCCCTATCCTTTTATTAGGCATCAGGCCAGTTTTTAAAATTTTAAGCCAAACTCCGCTTTTGAAAAAGTGGGTGGATCACCTCAGTGTAAGAAGCATACGTAAAAGTAAGAACATTAAAAAATATGGCTTTTTAGGGCTGTTGATCTTTGTAGCGATACCTCTCCCGGGCACAGGTGTGTGGAGTGGCACTCTTGCAGCAGCACTTTTAGATATTCGATTTAAGACCGCCTTCCCAGCAATTTTAATTGGGAATTTCATTGCAGGCATGGTTATAATGGCGATAAGCTATGGTATTATAAATGTAATTATTTAA
PROTEIN sequence
Length: 161
MDLIVKLLGILSAEFKTAVIAAMPIIELRGAIPFGISYGLSPVHAFVVSFLGSMLPVPILLLGIRPVFKILSQTPLLKKWVDHLSVRSIRKSKNIKKYGFLGLLIFVAIPLPGTGVWSGTLAAALLDIRFKTAFPAILIGNFIAGMVIMAISYGIINVII*