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SCNpilot_BF_INOC_scaffold_60_154

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 154348..154878

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJN7_ALKOO similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 180.0
  • Bit_score: 218
  • Evalue 6.90e-54
sigma 54 modulation protein/ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 180.0
  • Bit_score: 218
  • Evalue 1.90e-54
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:ABW20019.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkali similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 180.0
  • Bit_score: 218
  • Evalue 9.60e-54

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Taxonomy

Alkaliphilus oremlandii → Alkaliphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 531
ATGAAAGTAAACGTGACAGGAAGAAACCTAGTTATTACTGATGCTATTAGAGAACAAGTAGAAAAGAAATTATCAAAATTTGATAAGATGTTTAATAGTGACATCGAAGCAAGCGCTACATTTAGTGTACAAAAGAATAAACACATCGTGGAGGTGACTATTCCCCTTAAGAATGGGGCTTTATTTAGAGCAGAAGCAATTTCAGACGACATGTATATGTCGATTGATGAAGCGATAGATCGTATTTCTAAACAAATGAAGAAACATAAAACCAAACTTGAAAAAAGATTCCATTCAAATGATTCAATTCGTTTTGAAGAGATCCCGGACACAGTCGAACCGATCGTTGAGTCTTCAATTGTTAAAACCAAGAGATTCGGAGTTAAGCCAATGGGACCAGAAGAGGCTGTATTACAAATGGAGCTTCTAGGACATGATTTTTTCGTATTTTTAAATGGTGATACAGAAGAAATCAATGTGGTCTACAAACGAAAAGATGGTGATTTTGGTTTAATTGAGCCCTATTTATAG
PROTEIN sequence
Length: 177
MKVNVTGRNLVITDAIREQVEKKLSKFDKMFNSDIEASATFSVQKNKHIVEVTIPLKNGALFRAEAISDDMYMSIDEAIDRISKQMKKHKTKLEKRFHSNDSIRFEEIPDTVEPIVESSIVKTKRFGVKPMGPEEAVLQMELLGHDFFVFLNGDTEEINVVYKRKDGDFGLIEPYL*