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SCNpilot_BF_INOC_scaffold_60_159

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 160719..163049

Top 3 Functional Annotations

Value Algorithm Source
RNA binding S1 domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TLF6_ALKMQ similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 730.0
  • Bit_score: 959
  • Evalue 2.40e-276
Uncharacterized protein {ECO:0000313|EMBL:KJF25860.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 738.0
  • Bit_score: 972
  • Evalue 2.90e-280
RNA-binding S1 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 730.0
  • Bit_score: 959
  • Evalue 6.70e-277
  • rbh

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Taxonomy

Clostridium aceticum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2331
ATGAGCTTAAAATCAACGGATAAAGACACGGTGAATGCGACGATGGCGGATCAATCAGTTTTATCAGAGGAAACTACTAAAAATCCACTGGAAGATGAGCGTGTGAAGAAACTGATTATAGCGACTTTATCGCATGAGCTTTCTTTAAAGGCGTCTCAAGTGGATGCGACCATTGCCCTTATCGATGAAGGCAATACCATTCCATTTATCGCAAGATACCGTAAGGAAATGACAGGTGGTATCAGCGATGAGGTTTTAAGAAATTTTGACGACCGTCTTAAATATCTCAGAAATCTAGAGACTAGAAAAGTTGAAGTCATCAGAAACATAGATGAGCAAGGTAAGTTGACAGATGAGCTTAAAAAGGCCATCGATTCTGCGACGGTTTTACAGACGGTTGAAGATTTGTACCGACCATTCAAACAGAAGAAGAGTACGCGTGCGTCTAAGGCGATCGAACGTGGACTTGAGCCACTGGCTGAGGTGATCTTATCTCAAACGTTTACTTCAGGTGACTTTGAAGCGACAGCACGTCCTTACGTAGATGAAGAAAAGGGTGTCATGTCTGTGGAAGAAGCTATCGCTGGGGCGATGGATATTATTGCAGAGCGCGTATCAGACACGCCTGAGTTTAGAACGTATATTAGAAACCGTAGTGTTGCGGCTGGCGTTGTGACCTCTGTGGCGATTAACCCAGAGGAATCGACTGTATTTGATATGTATTACGATTATACTGAGCCAGTTTCGAAGATTGCCAACCACCGTGTGCTTGCGCTTAACAGAGGGGAGAGTGAAAAAGTCCTCCGCGTAAAGGTGCAAACACCTGATGAAGAGGTGGTCGCTTGGCTGAAAGACCAAATGATGAATGACCCTAAGACGAAAAGAAGAGTGGAAGCAGTTACAAGCACTTATCTTGAAGCAGCGATTGAGGATGCATATAAGCGTTTGATCTCGCCTTCTATTGAACGTGAAGTGAGAAATGGTCTTACTGAAGTGGCTGAGGAAGAGGCGATTAAGGTCTTTGGTAAAAATACGAAGTCACTTTTACTCGTAGCGCCAGTTAAGAATGTACGCGTTCTTGCGGTGGATCCAAGCTACCGTACTGGCTGTAAACTTGCGGTTTTAGATGAAACGGGCAAGTTGCTTGAGTATGCGACGATCTATCCGAACCAACCGCAAAATCAAGTAGAGGCATCTAAGGCGAAATTAACGGAATTAATTAAAAAACATAAAATAGACATCATCCCAATCGGCAATGGAACGGCTTCACGTGAGACGGAACAGCTTGTGGCAGATTTGATCAACCATTTGGAAGAGGAAGTTTATTATACCATCGTCAGTGAGGCAGGCGCTTCTGTTTATTCGGCATCTAAGCTGGCGACTGAGGAGTATCCAGACATCGACGTATCGATTCGAGGGGCGATATCCATCGGTCGAAGACTGCAAGATCCACTGGCTGAGCTGGTTAAGATCGATCCAAAGAGCATTGGCGTAGGTCAGTACCAACACGATGTTAACCAAAAGCGTTTGGAAGAGCAGCTTAAAAATGTCGTTGAAGATTGTGTTAACAGCGTTGGGGTTGACCTGAATACGGCGACACCATCACTTTTAAGCTACGTGTCGGGAATCTCATCGACGATTGCAAAAAACATCGTTCAGTTCAGAGATGAAAACGGCAAGTTTACAAAGCGTCAGCAGCTTTTAAAAGTGAAACGTTTGGGTGACAAGGTCTATCAACAGGCGGTCGGCTTCTTGAGAATTCCTGAAGCAGTGAACCCACTTGATAATACTGCGGTGCATCCTGAATCTTATGAGTCTGCAATGCGTCTACTTGAAACCTTGGGCTATACTGCGAATGATGTAAAAACAGGAGCGGTAAAGGATATCTCATCAAAGGTACTGATCCATTCTGGTATGATGGGTGCTGGGGATGAGTCTGTGAAGTACCAAAAAGGCTTAGAAAAGCTATCTGAACAGCTCGAAATCGGTGTGCCGACATTAAGAGATATCGTTGAGGAGATTAAAAAGCCAGGTCGCGACCCACGTGAAGACATGCCTAAGCCTATTTTTAGAAGTGACGTCCTTAAGATGGAAGACCTTGAAGTGGGGATGATCATGCAAGGCACTGTTAGAAATGTCGTGGATTTTGGTGCGTTCGTGGACATCGGCGTGAAACAAGATGGTCTTGTGCATATTTCTGAAATCAGCAACCGCTTTATCAAACATCCGATGCAAGTGCTCTCTGTAGGGGACAATGTGAAGGTTCAAATATTATCTCTCGATCACAAGCGTGGTAAGATTGGACTTACGATGAAGGGGATAAAAGAATAG
PROTEIN sequence
Length: 777
MSLKSTDKDTVNATMADQSVLSEETTKNPLEDERVKKLIIATLSHELSLKASQVDATIALIDEGNTIPFIARYRKEMTGGISDEVLRNFDDRLKYLRNLETRKVEVIRNIDEQGKLTDELKKAIDSATVLQTVEDLYRPFKQKKSTRASKAIERGLEPLAEVILSQTFTSGDFEATARPYVDEEKGVMSVEEAIAGAMDIIAERVSDTPEFRTYIRNRSVAAGVVTSVAINPEESTVFDMYYDYTEPVSKIANHRVLALNRGESEKVLRVKVQTPDEEVVAWLKDQMMNDPKTKRRVEAVTSTYLEAAIEDAYKRLISPSIEREVRNGLTEVAEEEAIKVFGKNTKSLLLVAPVKNVRVLAVDPSYRTGCKLAVLDETGKLLEYATIYPNQPQNQVEASKAKLTELIKKHKIDIIPIGNGTASRETEQLVADLINHLEEEVYYTIVSEAGASVYSASKLATEEYPDIDVSIRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVNQKRLEEQLKNVVEDCVNSVGVDLNTATPSLLSYVSGISSTIAKNIVQFRDENGKFTKRQQLLKVKRLGDKVYQQAVGFLRIPEAVNPLDNTAVHPESYESAMRLLETLGYTANDVKTGAVKDISSKVLIHSGMMGAGDESVKYQKGLEKLSEQLEIGVPTLRDIVEEIKKPGRDPREDMPKPIFRSDVLKMEDLEVGMIMQGTVRNVVDFGAFVDIGVKQDGLVHISEISNRFIKHPMQVLSVGDNVKVQILSLDHKRGKIGLTMKGIKE*