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SCNpilot_BF_INOC_scaffold_60_173

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 176763..178397

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, CdaR n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TWU1_ALKMQ similarity UNIREF
DB: UNIREF100
  • Identity: 36.6
  • Coverage: 555.0
  • Bit_score: 372
  • Evalue 6.70e-100
transcriptional regulator CdaR similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 553.0
  • Bit_score: 371
  • Evalue 3.20e-100
Transcriptional regulator, CdaR {ECO:0000313|EMBL:ABR50659.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredige similarity UNIPROT
DB: UniProtKB
  • Identity: 36.5
  • Coverage: 553.0
  • Bit_score: 371
  • Evalue 1.60e-99

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Taxonomy

Alkaliphilus metalliredigens → Alkaliphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1635
TTGGTCAACGAATCGAATGTTACATTAAAAGAAGTGCTTGAACTTCCTTTGTTTCAAACCTCAAAATTATTAACTGAACACGAGAATCTAAATATGCCGGTTTCATCGGTAAACGTAATGCTAGATACTCAAATAATCGAATGGATCGGACAAGACGGACAAATCATATTAACGACAGGTCAAATATTTCTAAAGGTATCTGTTTCAGAACAAATTGAGCTGTTTAAGGCGATTGCAGAAAAAAACGTAACAGCGGTATTTTTAAAGGTAACCCCTTACTTAGAGGCCATAGATCCTGAAGTAATCAAGGTATGCTCTGAGCTTAATCTTGCAATCCTCGACCTCGAATATGAAGTCTCATTCACAGAGATTTTTTCTACTGTTTATAGCCTAATGTTCGCGAGACAATCGGCTGTACTTGAGCGCGTTGAAAACCTACACAAGGATACCATGAACGTCGTTGTAAACGGTGGTAATCTAGATGATATTTTACGAAGCATTCATAAGACCATTACCTCTCCAGTATTCATAAGAGATTATTACTTTGAAGACACTTATTTCATTAAAAAGACTTTCGAAGACGACTATGCCCTTCTGTATGAGAACATAGAGAGTGTACAGCTAGATGGCAAAAACTCTAAAATGATTTGGGATACGATTACTTTTAAAGAAAAGGAAATTGAACGCCTGATCATCCCAATATTTGTAAAAAATCAAGTGTATGGCCACATCGTTACCTATGGAAAAGATAGAGCGATTTCAAACTATGACAAACTAGGACTTGAAGCGGCATCCAATATCATCGCGCTCGAGTTTTTAAAGAAGATATCCGTGCAGGAAGTAGAGAATAAATATAAGCTGGAGTTTTTTGACGACTTGATTTCATTTGACGAGCAAAGACGGTCGAAGGCGATTGAACGTGCAGCTAACTTTAGATTTTCGGAAAATGCGAGCTTTGTTATACTCGATGTCAATGTATCAGGGAAGAACAGTGGAGATGACGGTGAAAAAGCATTAAAAGCCGCCTATTTAATAGAAATGATCTGCAAAGACATGGGTCGCGCTTATATGATCTTAAATAAAAGCGACCGTATTTATGTTTTGGTAATGCTTAAAGAAGGTGAGGGCGCTCAAGCAGTTAAAAAGTACGTGAAATACATCTATGATATTTTACGCTCTAAAATGAAAAAATACAGTACCCAAGTGGGTATTGGCAGAATCTATAAAGGTCTTGGACAAGTGCACAAAAGCTTACAGGACGCAACAAAAGCACTTGAAGCGGCAACCTATTATATAGAAGAAGACATCGTCTTCTTTGAGGAAATGGGCATCTATAAAATTCTATCCAACAGTGCCATTAAGAGTGAACTGGAGATTTTCTATAAAGACATTTTAGAGCCACTTGCGCTATATGATAAACGCAAGGATACAGAGCTAGTCAAGACGCTTGAGGTTTACTTTGAGTGTAACGGCAATCTAAAAAAGATGTCTGAGAATTTATACACGCATTACAATACTGTGCTTTATCGACTCTCAAGAATTCAAGAAATTATGAAGATCAATCTGGAAAAGGAAGAGCATCGCTTTGCAGCGCAAACGGCATTAAAAGTCCATAAAATTCTGAGATTGTCATAA
PROTEIN sequence
Length: 545
LVNESNVTLKEVLELPLFQTSKLLTEHENLNMPVSSVNVMLDTQIIEWIGQDGQIILTTGQIFLKVSVSEQIELFKAIAEKNVTAVFLKVTPYLEAIDPEVIKVCSELNLAILDLEYEVSFTEIFSTVYSLMFARQSAVLERVENLHKDTMNVVVNGGNLDDILRSIHKTITSPVFIRDYYFEDTYFIKKTFEDDYALLYENIESVQLDGKNSKMIWDTITFKEKEIERLIIPIFVKNQVYGHIVTYGKDRAISNYDKLGLEAASNIIALEFLKKISVQEVENKYKLEFFDDLISFDEQRRSKAIERAANFRFSENASFVILDVNVSGKNSGDDGEKALKAAYLIEMICKDMGRAYMILNKSDRIYVLVMLKEGEGAQAVKKYVKYIYDILRSKMKKYSTQVGIGRIYKGLGQVHKSLQDATKALEAATYYIEEDIVFFEEMGIYKILSNSAIKSELEIFYKDILEPLALYDKRKDTELVKTLEVYFECNGNLKKMSENLYTHYNTVLYRLSRIQEIMKINLEKEEHRFAAQTALKVHKILRLS*