ggKbase home page

SCNpilot_BF_INOC_scaffold_690_12

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: comp(7614..8096)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, CarD family n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B426_CLOA9 similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 157.0
  • Bit_score: 202
  • Evalue 2.70e-49
CarD family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 157.0
  • Bit_score: 202
  • Evalue 7.60e-50
Transcriptional regulator, CarD family {ECO:0000313|EMBL:AFS79316.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 157.0
  • Bit_score: 202
  • Evalue 3.80e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gottschalkia acidurici → Gottschalkia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 483
ATGTTTAAAGTTGGAGATAAAATCGTATACCCTATGCATGGTGCTGGGGTTATTGAATCTATCGAGCACAAGGAATTGTTAGGTACGGACAAGGAGTTCTATATTCTTAAGTTACCAATAAAAAATATGAAGGTAATGATTCCTATTGAAAATGCTGAGGAGCTAGGGGTACGTAAGGTTGTTGATCAGAATATATTTAAAGATGTCATGGCACTTCTTGCTCAGAACAAAGAAGTGATGCCAGATAACTGGAATCGAAGATATCGTGCAAATCTTGAAAAGGTAAAATCGGGTGATATATTCGAAGTTGCTGCGGTTGTTAGAAACTTAGAGATACTAGACAGAGAGAAAGGTTTATCTACTGGAGAACGCAAAATGCTCAATAATTCTAAGCAAATATTAATTAGTGAGCTGACGCTGGTAAGAGACCTTAAAGAGGACGATGTGGTTTCGTTGGTTAATGCAACGATTGGAAGTCATTGA
PROTEIN sequence
Length: 161
MFKVGDKIVYPMHGAGVIESIEHKELLGTDKEFYILKLPIKNMKVMIPIENAEELGVRKVVDQNIFKDVMALLAQNKEVMPDNWNRRYRANLEKVKSGDIFEVAAVVRNLEILDREKGLSTGERKMLNNSKQILISELTLVRDLKEDDVVSLVNATIGSH*