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SCNpilot_BF_INOC_scaffold_120

Search features with annotation key words

Displaying items 1-30 of 184 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_120_1
Cellulophaga algicola, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1..1059)
-----------------
DNA (1059bp)
protein (353aa)
Thrombospondin type 3 repeat-containing protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6X7J0_CELAD
thrombospondin type 3 repeat-containing protein
Thrombospondin type 3 repeat-containing protein {ECO:0000313|EMBL:ADV49672.1}; Flags: Precursor;; TaxID=688270 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Ce
SCNpilot_BF_INOC_scaffold_120_2
unknown

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comp(4418..5089)
-----------------
DNA (672bp)
protein (224aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_120_3
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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5523..8462
-----------------
DNA (2940bp)
protein (980aa)
Signal transduction histidine kinase, LytS n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIV9_FLUTR
signal transduction histidine kinase LytS Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
signal transduction histidine kinase LytS
SCNpilot_BF_INOC_scaffold_120_4
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8437..9144
-----------------
DNA (708bp)
protein (236aa)
Response regulator n=1 Tax=Kordia algicida OT-1 RepID=A9DPK7_9FLAO
Response regulator {ECO:0000313|EMBL:EDP97459.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
two component transcriptional regulator, lyttr family
SCNpilot_BF_INOC_scaffold_120_5
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(9212..11506)
-----------------
DNA (2295bp)
protein (765aa)
Transporter, CPA2 family n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11PB0_CYTH3
Na+/H+-exchanging protein
Transporter, CPA2 family {ECO:0000313|EMBL:ABG60753.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC
SCNpilot_BF_INOC_scaffold_120_6
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(11820..12542)
-----------------
DNA (723bp)
protein (241aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11PB1_CYTH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG60752.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC
SCNpilot_BF_INOC_scaffold_120_7
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(12508..13275)
-----------------
DNA (768bp)
protein (256aa)
Signal transduction histidine kinase LytS id=3843037 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
signal transduction histidine kinase LytS Tax=GWF2_Bacteroidetes_41_31_curated
signal transduction histidine kinase LytS
SCNpilot_BF_INOC_scaffold_120_8
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13506..15758
-----------------
DNA (2253bp)
protein (751aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID28_FLUTR
SCNpilot_BF_INOC_scaffold_120_9
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(15856..17943)
-----------------
DNA (2088bp)
protein (696aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Dictyostelium fasciculatum (strain SH3) RepID=F4PWU5_DICFS
regulator of chromosome condensation
Regulator of chromosome condensation {ECO:0000313|EMBL:BAP30469.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chry
SCNpilot_BF_INOC_scaffold_120_10
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

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comp(18089..18805)
-----------------
DNA (717bp)
protein (239aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9N9_FLUTR
hypothetical protein; K06890 Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_120_11
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18817..19401)
-----------------
DNA (585bp)
protein (195aa)
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase 1 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9N6_FLUTR
SCNpilot_BF_INOC_scaffold_120_12
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19413..19844)
-----------------
DNA (432bp)
protein (144aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9N5_FLUTR
hypothetical protein
SCNpilot_BF_INOC_scaffold_120_13
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20224..20946
-----------------
DNA (723bp)
protein (241aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
Type III pantothenate kinase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9R4_FLUTR
Baf family transcriptional acitvator
SCNpilot_BF_INOC_scaffold_120_14
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20906..22282
-----------------
DNA (1377bp)
protein (459aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9R5_FLUTR
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_120_15
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22285..22815
-----------------
DNA (531bp)
protein (177aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9R6_FLUTR
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_120_16
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22818..23033
-----------------
DNA (216bp)
protein (72aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_BF_INOC_scaffold_120_17
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23014..25494
-----------------
DNA (2481bp)
protein (827aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9R8_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43064.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviic
SCNpilot_BF_INOC_scaffold_120_18
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25651..26847
-----------------
DNA (1197bp)
protein (399aa)
Lipase class 3 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBJ6_FLUTR
lipase class 3
Lipase class 3 {ECO:0000313|EMBL:AEA44304.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffe
SCNpilot_BF_INOC_scaffold_120_19
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26849..27601)
-----------------
DNA (753bp)
protein (251aa)
Alpha/beta hydrolase fold protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9S7_FLUTR
alpha/beta hydrolase
alpha/beta hydrolase fold protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_BF_INOC_scaffold_120_20
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27660..28955)
-----------------
DNA (1296bp)
protein (432aa)
Peptidase M24 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9S6_FLUTR
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:AEA43072.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffen
SCNpilot_BF_INOC_scaffold_120_21
unknown

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29130..29648
-----------------
DNA (519bp)
protein (173aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_120_22
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29733..30821
-----------------
DNA (1089bp)
protein (363aa)
ATPase-like, ParA/MinD n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IK19_FLUTR
ParA/MinD-like ATPase
ATPase-like, ParA/MinD {ECO:0000313|EMBL:AEA42918.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strai
SCNpilot_BF_INOC_scaffold_120_23
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30814..31065
-----------------
DNA (252bp)
protein (84aa)
Nitrogen-fixing NifU domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IK18_FLUTR
nitrogen-fixing NifU domain-containing protein
Nitrogen-fixing NifU domain-containing protein {ECO:0000313|EMBL:AEA42917.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Flu
SCNpilot_BF_INOC_scaffold_120_24
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

31069..31458
-----------------
DNA (390bp)
protein (130aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_BF_INOC_scaffold_120_25
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31462..32226
-----------------
DNA (765bp)
protein (255aa)
alpha/beta hydrolase fold protein; K01175 [EC:3.1.-.-] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Alpha/beta hydrolase fold protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9U9_FLUTR
alpha/beta hydrolase
SCNpilot_BF_INOC_scaffold_120_26
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

32230..33252
-----------------
DNA (1023bp)
protein (341aa)
thiamine-phosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
thiamine-phosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9T1_FLUTR
SCNpilot_BF_INOC_scaffold_120_27
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33349..33750)
-----------------
DNA (402bp)
protein (134aa)
Sporulation domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB94_FLUTR
sporulation domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
sporulation domain-containing protein
SCNpilot_BF_INOC_scaffold_120_28
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

33972..35288
-----------------
DNA (1317bp)
protein (439aa)
Cytochrome c class I n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB93_FLUTR
cytochrome c class I
cytochrome c class I Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_BF_INOC_scaffold_120_29
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

35316..38561
-----------------
DNA (3246bp)
protein (1082aa)
Molybdopterin oxidoreductase, iron-sulfur binding subunit n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB92_FLUTR
molybdopterin oxidoreductase, iron-sulfur-binding subunit
Molybdopterin oxidoreductase, iron-sulfur binding subunit {ECO:0000313|EMBL:AEA43178.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;"
SCNpilot_BF_INOC_scaffold_120_30
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

38584..40011
-----------------
DNA (1428bp)
protein (476aa)
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB91_FLUTR
quinol:cytochrome c oxidoreductase quinone-binding subunit 1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1 {ECO:0000313|EMBL:AEA43177.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.
Displaying items 1-30 of 184 in total

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