ggKbase home page

SCNpilot_BF_INOC_scaffold_19

Search features with annotation key words

Displaying items 1-30 of 507 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_19_1
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(353..1099)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8QZ56_OWEHD
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
SCNpilot_BF_INOC_scaffold_19_2
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1139..2074)
DNA (936bp) protein (312aa)
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GTC2_9SPHI
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake {ECO:0000313|EMBL:EOR94943.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphing
DNA protecting protein DprA
SCNpilot_BF_INOC_scaffold_19_3
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

2307..4643
DNA (2337bp) protein (779aa)
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
TonB-dependent receptor id=4544039 bin=GWF2_Bacteroidetes_35_48 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
TonB-dependent receptor plug
SCNpilot_BF_INOC_scaffold_19_4
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4730..5377
DNA (648bp) protein (216aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_cura
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHE7_FLUTR
SCNpilot_BF_INOC_scaffold_19_5
unknown

Not on your lists

comp(5290..5565)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_19_6
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5677..6414
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248E7E7
hypothetical protein Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_BF_INOC_scaffold_19_7
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6483..7172
DNA (690bp) protein (230aa)
NAD-dependent deacetylase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIB0_FLUTR
NAD-dependent deacetylase
NAD-dependent deacetylase {ECO:0000313|EMBL:AEA43819.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (st
SCNpilot_BF_INOC_scaffold_19_8
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7269..8147
DNA (879bp) protein (293aa)
5,10-methylene-tetrahydrofolate dehydrogenase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA73_FLUTR
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis
SCNpilot_BF_INOC_scaffold_19_9
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8231..8839
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDJ4_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43367.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviic
SCNpilot_BF_INOC_scaffold_19_10
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8964..9734
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IUL7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02917.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
FkbM family methyltransferase
SCNpilot_BF_INOC_scaffold_19_11
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9731..10207
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFY3_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43604.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (stra
SCNpilot_BF_INOC_scaffold_19_12
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10200..11111)
DNA (912bp) protein (304aa)
Glycosyl transferase family protein n=1 Tax=Flavobacterium sp. F52 RepID=J1ALM3_9FLAO
family 2 glycosyl transferase Tax=RBG_13_Bacteroidetes_46_8_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_19_13
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11098..12048)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF76_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43550.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (stra
SCNpilot_BF_INOC_scaffold_19_14
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12045..13676)
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2SD22_9FLAO
Membrane protein {ECO:0000313|EMBL:KIA98321.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_19_15
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13777..14706)
DNA (930bp) protein (310aa)
Transcriptional regulator, LysR family n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMI7_RUNSL
transcriptional regulator Tax=GWC2_Ignavibacteria_rel_36_12_curated
LysR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_19_16
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14882..15259)
DNA (378bp) protein (126aa)
Glycine cleavage system H protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJN0_FLUTR
glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola t
SCNpilot_BF_INOC_scaffold_19_17
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15401..16483
DNA (1083bp) protein (361aa)
Bacterial peptide chain release factor 2 (BRF-2) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJN1_FLUTR
peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffen
SCNpilot_BF_INOC_scaffold_19_18
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

16473..16826
DNA (354bp) protein (118aa)
arsenate reductase; K00537 arsenate reductase [EC:1.20.4.1] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037CD865
glutaredoxin-dependent arsenate reductase
SCNpilot_BF_INOC_scaffold_19_19
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

17064..19700
DNA (2637bp) protein (879aa)
PDK repeat-containing protein Tax=GWF2_Bacteroidetes_43_63_curated
PDK repeat-containing protein id=4606363 bin=GWF2_Bacteroidetes_43_63 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
PKD domain-containing protein
SCNpilot_BF_INOC_scaffold_19_20
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19845..21371
DNA (1527bp) protein (509aa)
Putative uncharacterized protein id=4001580 bin=GWF2_Bacteroidetes_38_335 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
leucine-rich repeat-containing protein Tax=GWF2_Bacteroidetes_38_335_curated
sboK; leucine rich repeat virulence protein
SCNpilot_BF_INOC_scaffold_19_21
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21378..22448)
DNA (1071bp) protein (357aa)
Glycosyl transferase group 1 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II37_FLUTR
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEA42737.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis
SCNpilot_BF_INOC_scaffold_19_22
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22445..23671)
DNA (1227bp) protein (409aa)
Glycosyl transferase group 1 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II36_FLUTR
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEA42736.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis
SCNpilot_BF_INOC_scaffold_19_23
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23897..24568
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036E8489
MgtC family protein
MgtC family protein {ECO:0000313|EMBL:ACU07142.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 351
SCNpilot_BF_INOC_scaffold_19_24
Nitritalea halalkaliphila, Nitritalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24647..25135
DNA (489bp) protein (163aa)
Glutathione peroxidase n=1 Tax=Nitritalea halalkaliphila LW7 RepID=I5C953_9BACT
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1189621 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Nitritalea.;" source="Nitritalea halalkaliphila LW7
glutathione peroxidase
SCNpilot_BF_INOC_scaffold_19_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25181..26692
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSK3_9SPHI
ATPase
ATPase {ECO:0000313|EMBL:AHF16059.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_BF_INOC_scaffold_19_26
unknown

Not on your lists

26805..27059
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_19_27
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

27101..27760
DNA (660bp) protein (220aa)
Putative uncharacterized protein id=3566497 bin=GWF2_Planctomycetes_50_10 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hypothetical protein Tax=GWF2_Planctomycetes_50_10_curated
SCNpilot_BF_INOC_scaffold_19_28
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27832..30444)
DNA (2613bp) protein (871aa)
ATP-dependent chaperone ClpB n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIP1_FLUTR
ATP-dependent chaperone ClpB
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (str
SCNpilot_BF_INOC_scaffold_19_29
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30581..32944)
DNA (2364bp) protein (788aa)
TonB-dependent receptor plug n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEF8_FLUTR
TonB-dependent receptor plug; K02014 iron complex outermembrane recepter protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
TonB-dependent receptor plug
SCNpilot_BF_INOC_scaffold_19_30
Equid herpesvirus 4, Varicellovirus, Herpesvirales, Viruses

Not on your lists

comp(33083..34660)
DNA (1578bp) protein (526aa)
Glycoprotein gp2 {ECO:0000313|EMBL:AAK58439.1}; Flags: Fragment;; TaxID=10331 species="Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus.;" source=
Displaying items 1-30 of 507 in total

View Taxonomy