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SCNpilot_BF_INOC_scaffold_256_28

Organism: SCNpilot_BF_INOC_Flavobacteriales_40_20

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(20913..21419)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=3 Tax=Elizabethkingia RepID=H0KPD7_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 167.0
  • Bit_score: 214
  • Evalue 9.40e-53
RNA polymerase {ECO:0000313|EMBL:KGO11192.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (C similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 167.0
  • Bit_score: 218
  • Evalue 5.40e-54
sigW_4; ECF RNA polymerase sigma factor SigW similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 167.0
  • Bit_score: 215
  • Evalue 9.10e-54

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Taxonomy

Elizabethkingia miricola → Elizabethkingia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 507
ATGGATCAGCACGCTTTTCAGTCTTCCGTTTTTGTTCATAAGGACAAGATGTTTCGCCTGGCGAAAAGACTGCTGGTAAGTCCTGATGAAGCTTTTGATACGGTACAGGATGTAATGGTAAAGTTATGGCAGATGAGAGCGGAGCTGCATCGTTACAGAAACCTGGAAGCATTTGCAATGCAGTGTATTAAAAACGAATGCTTTAACCGGCTGAAACATGAAGAAGTAGCGGCTGCCCACCGGCAGTCGGTAGCTGCCGGAACGAGGGCAGAATCATTTCCGGGAGCGGATAATACAAAGGAGATTATCCTGGAGCTGATCAACGCGCTGCCTCCGAAGCAGCAGATGGTGATGCATCTGAAAGATATTGAAGAATATGATATTCCGGAGATCGCGGAGATCATGGAGATAGAAGAAAATGCTGTTCGTATCAACCTGATGCGGGCGAGGCAAAAGATTAAAGACCAGCTTGAAAAATTGTTTGAATATGAGCAACGACAAAATTGA
PROTEIN sequence
Length: 169
MDQHAFQSSVFVHKDKMFRLAKRLLVSPDEAFDTVQDVMVKLWQMRAELHRYRNLEAFAMQCIKNECFNRLKHEEVAAAHRQSVAAGTRAESFPGADNTKEIILELINALPPKQQMVMHLKDIEEYDIPEIAEIMEIEENAVRINLMRARQKIKDQLEKLFEYEQRQN*