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SCNpilot_BF_INOC_scaffold_256

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_256_1
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(248..553)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IID1_FLUTR
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_256_2
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(550..1635)
DNA (1086bp) protein (362aa)
DNA replication and repair protein RecF n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IID0_FLUTR
DNA replication and repair protein recF; K03629 DNA replication and repair protein RecF Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
DNA replication and repair protein recF
SCNpilot_BF_INOC_scaffold_256_3
unknown

Not on your lists

comp(1635..1958)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_256_4
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1955..2575)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHN3_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44811.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviic
SCNpilot_BF_INOC_scaffold_256_5
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2572..3252)
DNA (681bp) protein (227aa)
Caffeoyl-CoA O-methyltransferase (EC:2.1.1.104) Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
O-methyltransferase family 3 n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EYA5_EMTOG
O-methyltransferase family 3
SCNpilot_BF_INOC_scaffold_256_6
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3320..3808
DNA (489bp) protein (163aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKF1_FLUTR
tRNA/rRNA methyltransferase SpoU Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
tRNA/rRNA methyltransferase SpoU
SCNpilot_BF_INOC_scaffold_256_7
unknown

Not on your lists

3857..4225
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_256_8
unknown

Not on your lists

4263..4628
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_256_9
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4698..5408)
DNA (711bp) protein (237aa)
Probable transcriptional regulatory protein Fluta_1167 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB76_FLUTR
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_256_10
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5567..5911
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000364F230
hypothetical protein Tax=GWB2_Bacteroidetes_41_8_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_256_11
unknown

Not on your lists

5904..6296
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_256_12
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6302..7291)
DNA (990bp) protein (330aa)
bifunctional phosphoglucose/phosphomannose isomerase; K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGM8_FLUTR
bifunctional phosphoglucose/phosphomannose isomerase
SCNpilot_BF_INOC_scaffold_256_13
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7390..7905
DNA (516bp) protein (172aa)
Thioesterase superfamily protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGM7_FLUTR
thioesterase superfamily protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
thioesterase
SCNpilot_BF_INOC_scaffold_256_14
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7888..8868)
DNA (981bp) protein (327aa)
Glycosyl transferase family 9 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGM6_FLUTR
glycosyl transferase 9
Glycosyl transferase family 9 {ECO:0000313|EMBL:AEA43643.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis
SCNpilot_BF_INOC_scaffold_256_15
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8987..9508
DNA (522bp) protein (174aa)
Ribosome maturation factor RimP n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIZ4_FLUTR
Ribosome maturation factor rimP
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taf
SCNpilot_BF_INOC_scaffold_256_16
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9516..10754
DNA (1239bp) protein (413aa)
NusA antitermination factor n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIZ5_FLUTR
NusA antitermination factor; K02600 N utilization substance protein A Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
NusA antitermination factor
SCNpilot_BF_INOC_scaffold_256_17
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10793..13630
DNA (2838bp) protein (946aa)
Translation initiation factor IF-2 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIZ6_FLUTR
translation initiation factor 2 (bIF-2)
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fl
SCNpilot_BF_INOC_scaffold_256_18
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13654..14253
DNA (600bp) protein (200aa)
putative Zn-ribbon-containing protein involved in phosphonate metabolism (EC:3.11.1.2)
Uncharacterized protein n=5 Tax=Myroides odoratimimus RepID=H1GQJ7_9FLAO
Putative alkylphosphonate utilization operon protein PhnA {ECO:0000313|EMBL:EHO06571.1}; TaxID=883154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;"
SCNpilot_BF_INOC_scaffold_256_19
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14327..15781
DNA (1455bp) protein (485aa)
RNA polymerase, sigma 54 subunit, RpoN/SigL n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHK0_FLUTR
RNA polymerase sigma-54 subunit RpoN/SigL
RNA polymerase, sigma 54 subunit, RpoN/SigL {ECO:0000313|EMBL:AEA43765.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluvii
SCNpilot_BF_INOC_scaffold_256_20
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

15781..16440
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHK1_FLUTR
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_256_21
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

16483..17322
DNA (840bp) protein (280aa)
Peptidase M48 Ste24p n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF91_FLUTR
peptidase M48 Ste24p Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
peptidase M48 Ste24p
SCNpilot_BF_INOC_scaffold_256_22
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

17319..18080
DNA (762bp) protein (254aa)
arylformamidase (EC:3.5.1.9)
Probable arylformamidase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XRC3_FLAIG
metal-dependent hydrolase Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
SCNpilot_BF_INOC_scaffold_256_23
unknown

Not on your lists

18215..18655
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_256_24
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18713..19081
DNA (369bp) protein (123aa)
peptide-methionine (R)-S-oxide reductase (EC:1.8.4.11 1.8.4.12)
Peptide-methionine (R)-S-oxide reductase {ECO:0000313|EMBL:ADY52979.1}; EC=1.8.4.11 {ECO:0000313|EMBL:ADY52979.1};; EC=1.8.4.12 {ECO:0000313|EMBL:ADY52979.1};; TaxID=762903 species="Bacteria; Bacteroi
Peptide-methionine (R)-S-oxide reductase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SE53_PEDSD
SCNpilot_BF_INOC_scaffold_256_25
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19233..19784)
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Elizabethkingia anophelis RepID=L8K3M3_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGE13630.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
SCNpilot_BF_INOC_scaffold_256_26
Ancylostoma ceylanicum, Ancylostoma, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(19803..20291)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CI45_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EPB65449.1}; Flags: Fragment;; TaxID=53326 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylost
hypothetical protein
SCNpilot_BF_INOC_scaffold_256_27
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20303..20932)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0PN58_ELIME
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQB91453.1}; TaxID=1355388 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia m
SCNpilot_BF_INOC_scaffold_256_28
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20913..21419)
DNA (507bp) protein (169aa)
RNA polymerase ECF-type sigma factor n=3 Tax=Elizabethkingia RepID=H0KPD7_9FLAO
RNA polymerase {ECO:0000313|EMBL:KGO11192.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (C
sigW_4; ECF RNA polymerase sigma factor SigW
SCNpilot_BF_INOC_scaffold_256_29
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21636..22949
DNA (1314bp) protein (438aa)
adenosylhomocysteinase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAQ7_FLUTR
SCNpilot_BF_INOC_scaffold_256_30
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23028..23321)
DNA (294bp) protein (98aa)
Plasmid stabilization system n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CS23_ELIME
Plasmid stabilization protein {ECO:0000313|EMBL:KFF25510.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobact
plasmid stabilization system
Displaying items 1-30 of 80 in total

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