ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_BF_INOC_scaffold_56_229

Organism: SCNpilot_BF_INOC_Flavobacteriales_40_20

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(247009..249285)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBC9_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 34.5
  • Coverage: 765.0
  • Bit_score: 408
  • Evalue 2.00e-110
Uncharacterized protein {ECO:0000313|EMBL:EDM37028.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BA similarity UNIPROT
DB: UniProtKB
  • Identity: 34.5
  • Coverage: 765.0
  • Bit_score: 408
  • Evalue 2.80e-110
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 805.0
  • Bit_score: 352
  • Evalue 2.80e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter sp. BAL39 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2277
ATGAGTGGATTTAAATTGTTGGCAATAAGACCATTGGAGGGATGTGATGAAAAGTATAGGAAAAATTTGATTCCGGGACAGATTTATCAATTTTATCAGGATTATCAATTTGAAATTTCCAAGGATGAAGAAGGCAAAGAAGTTGTTTCTGCAAAACCTTTAGAAACTAACGTTCCAATGGATTTGTACAATATTAGACGAAAAGATAAGCCAGATTTGAAGATTAATATTTCTGCAATTGTAGGTAAGAACGGTAGTGGGAAAAGTTCATTGCTTGAAATTATTTATGGTACAATCTATTTGCTAGGTGAACAGGAAGAACTTTTTGATGATGAAAGTAGCTTTGATGAGGCAAATAGACTCCTTTTAGATGCAAAAGATTTGTTCAATAAACATAAGAAATTTAAAGAAGAAACAGAATTAGAATGGTACAAGAATTTTTTTGAAGATATTACGATAAATCTAGAAGGTAATTCGGAATACCTAAAACTGAATGAAGACAAGTATAAACGAATCAGAAAATTATTTGAACGAACAAAACCAGATAATTACGAAGAATTAATAAATATTCGACAACGAACTGTTGACTCGTTTAATCACATTCATACTGGACTGAAAACAGAAATTTATTTTGAAATAGATAGTGTTATCTATGTTATTCGCGTGAATAATGATGAAAAACAAGTTTCAATTACTCCTATCCACGGATTATCCATTGAAGATTATAAAAAGAAAGAACTTTCTATTCTTCAAACATTCTTTTATTCTATAGCTGTCAATTATTCAATTCATGGATTAAACGATCGTACAATTGGTAGTTGGATAAATCCGCTATTTCATAAGAATGATGGTTATCAAACTCCTTTAGTTATCAATCCAATGAGAACACATGGGGATTTTAAAATTGAAAGAGAAGAATATCTAGCAAAATCAAGGTTGTTATCTAACCTATTATTGAATGATGAAAAAAATGAACACCGGAAATTAACTGATAAACAGATAGCAACCCACCTAATATTTACTCTTAACAAAGAGAAAATTGGTCCAGATAGACTTAAAACAATTAATGAAGACACACTTAAGGATAGAATTACTAAACAAATCCAGAGTGAATTGTATGGAACATTCAATATCAATATTGATTTAATTAATATTCCATTTAAGCAAGAAATTGAAAATTACATACTCAACAAAATTGAAAAAATATTGTATGTGTATAAACCCTATGAAAAAACATACACGAATAACTTAGCAAGATTTAGAGATGTTGTATTTGATACTGTAATAGAAGAAAAAATTCCTCAACTCATAAATGCGCTTTATACAGATGATTCTCACATTACGTTTAAATTGCGTCAGGCGATCAATTATTTAAAAAATGGCTTATTAGAAAATGTTGCTGATAAAATAGAGTGGGAATTTGGTAACCATAAATATCTTTTGGAAAGTTGGAATGATAAAGATCAATATGTCATTTCCATTGAAAGTTTATCAGATAAGCTGGCTAAAAAAACAAATGATCGACTAATTAATTTAATCCCTCCGTCGCTTTTTGATATTGAGATTATATTAACTGATGATAAATCTCTGTCGTCTTTTAAGCTATTAAGTTCAGGTGAACAGCAACATATTCACTCTATACAATCCATTCTTTATCATCTTTATAACATTGATTCTGTTTTCAATCAACCAGATCATAGTGAGATTGTTGGTACACGCTTTACATACCCAAATATTAATATAGTCTTGGATGAAATTGAGTTATATTTCCATCCAGAGTTTCAAAGAAGATTTGTTTCTGATTTACTTAAATCGATAGGACGTTTGAATTTAGGTAAAAATGATGCTAAAGATAATTTTTTGGGTATCAATTCAATCAATATTTTGTTTGCTACTCATTCGCCCTTTATTCTTTCAGACATTCCATCACAAAATGTTCTCCGTTTGGAAAATGGCATTCCATCTAATAATGAGCAAAAAGGAACTTTTGGAGCAAATATTCATGAGATGCTCAATGACAATTTTTTCTTAGATAAAGGTGCAATGGGAGAGTTTGCTAAGACGCATATTGAGGATATAGCCAAAGAAATAATAGATTCAAATTTCATTGAACTCAAAAAAGTATACGAATTATCAAAAAAGATTGAAATAATTGAAGAACCGCTTATAAAAGAAAGACTTGAGTTTTTACTTGCACAAAAGAGTTCTTTGAAAAGTAAAGATGAAATCATTGCCGAGTTGAAACAAGAAATTCAGGGTTTGAAAAATAAAAGTTAA
PROTEIN sequence
Length: 759
MSGFKLLAIRPLEGCDEKYRKNLIPGQIYQFYQDYQFEISKDEEGKEVVSAKPLETNVPMDLYNIRRKDKPDLKINISAIVGKNGSGKSSLLEIIYGTIYLLGEQEELFDDESSFDEANRLLLDAKDLFNKHKKFKEETELEWYKNFFEDITINLEGNSEYLKLNEDKYKRIRKLFERTKPDNYEELINIRQRTVDSFNHIHTGLKTEIYFEIDSVIYVIRVNNDEKQVSITPIHGLSIEDYKKKELSILQTFFYSIAVNYSIHGLNDRTIGSWINPLFHKNDGYQTPLVINPMRTHGDFKIEREEYLAKSRLLSNLLLNDEKNEHRKLTDKQIATHLIFTLNKEKIGPDRLKTINEDTLKDRITKQIQSELYGTFNINIDLINIPFKQEIENYILNKIEKILYVYKPYEKTYTNNLARFRDVVFDTVIEEKIPQLINALYTDDSHITFKLRQAINYLKNGLLENVADKIEWEFGNHKYLLESWNDKDQYVISIESLSDKLAKKTNDRLINLIPPSLFDIEIILTDDKSLSSFKLLSSGEQQHIHSIQSILYHLYNIDSVFNQPDHSEIVGTRFTYPNINIVLDEIELYFHPEFQRRFVSDLLKSIGRLNLGKNDAKDNFLGINSINILFATHSPFILSDIPSQNVLRLENGIPSNNEQKGTFGANIHEMLNDNFFLDKGAMGEFAKTHIEDIAKEIIDSNFIELKKVYELSKKIEIIEEPLIKERLEFLLAQKSSLKSKDEIIAELKQEIQGLKNKS*