ggKbase home page

SCNpilot_BF_INOC_scaffold_388_10

Organism: SCNpilot_BF_INOC_Plasmid_65_193

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 10780..11091

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbD n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003765F3F similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 98.0
  • Bit_score: 92
  • Evalue 2.60e-16
trbD-1; conjugal transfer protein TrbD 1 similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 86.0
  • Bit_score: 92
  • Evalue 5.50e-17
Conjugal transfer protein TrbD 1 {ECO:0000313|EMBL:AIC29729.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 86.0
  • Bit_score: 92
  • Evalue 2.70e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGGACGAACCACGCCGTATCCCTATCCACCGGAGTCTGAACCGCCCGAACCTGTTGCTTGGCGGCGACCGCGAGCTGGTCTTGATGACCATGCTTTGCGCCGCGATGGTCGGCTTCACTGCCTCGTCGCTGCTGCAATTGGGTATCGGCGTGGTGTTGTGGCTGGCCGTGCATGCCGGCCTGGTGCAGATGGCGAAGTCCGACCCGAACATGCGCGACGTGTACGTGCGCCATGTGAAGTACCGGCCCTTCTACTCCGCGCGCACCGGGCTGGACAGCAAGCCGCTCCAAGCTCCTGAATGGAAAGACTGA
PROTEIN sequence
Length: 104
MDEPRRIPIHRSLNRPNLLLGGDRELVLMTMLCAAMVGFTASSLLQLGIGVVLWLAVHAGLVQMAKSDPNMRDVYVRHVKYRPFYSARTGLDSKPLQAPEWKD*