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SCNpilot_BF_INOC_scaffold_388

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_388_1
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27..470)
DNA (444bp) protein (148aa)
Single-stranded DNA-binding protein n=1 Tax=Marichromatium purpuratum 984 RepID=F9U4N5_MARPU
single-stranded DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=765910 species="Bacteria; Proteobacteria; Gamm
SCNpilot_BF_INOC_scaffold_388_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(483..3083)
DNA (2601bp) protein (867aa)
TRAG family protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1A2_HALNC
TRAG family protein
TRAG family protein {ECO:0000313|EMBL:ACX96475.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus
SCNpilot_BF_INOC_scaffold_388_3

Not on your lists

comp(3134..4729)
DNA (1596bp) protein (532aa)
TraO protein n=1 Tax=uncultured bacterium RepID=Q91US1_9BACT
TraO protein {ECO:0000313|EMBL:CAC79166.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative traO protein
SCNpilot_BF_INOC_scaffold_388_4
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4895..5485)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121G6_POLSJ
Uncharacterized protein {ECO:0000313|EMBL:KGG84791.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Ps
hypothetical protein
SCNpilot_BF_INOC_scaffold_388_5
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5508..7409)
DNA (1902bp) protein (634aa)
Uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GUQ0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGG84790.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Ps
type IV secretory pathway VirD2 pilin (relaxase)-like protein
SCNpilot_BF_INOC_scaffold_388_6
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7448..7876)
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJ66_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM31004.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (s
SCNpilot_BF_INOC_scaffold_388_7
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8436..9323)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZJ60_TERRK
Uncharacterized protein {ECO:0000313|EMBL:KGG84784.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Ps
hypothetical protein
SCNpilot_BF_INOC_scaffold_388_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9402..10451
DNA (1050bp) protein (350aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L177_HALNC
P-type conjugative transfer ATPase TrbB
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:ACX96450.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" sourc
SCNpilot_BF_INOC_scaffold_388_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10438..10776
DNA (339bp) protein (113aa)
Conjugal transfer protein TrbC n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L174_HALNC
conjugal transfer protein Trbc
Conjugal transfer protein TrbC {ECO:0000313|EMBL:ACX96447.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Haloth
SCNpilot_BF_INOC_scaffold_388_10
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10780..11091
DNA (312bp) protein (104aa)
conjugal transfer protein TrbD n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003765F3F
trbD-1; conjugal transfer protein TrbD 1
Conjugal transfer protein TrbD 1 {ECO:0000313|EMBL:AIC29729.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobiu
SCNpilot_BF_INOC_scaffold_388_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11093..13552
DNA (2460bp) protein (820aa)
CagE, TrbE, VirB component of type IV transporter system, conserved region n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L172_HALNC
type IV transporter system CagE/TrbE/VirB
CagE, TrbE, VirB component of type IV transporter system, conserved region {ECO:0000313|EMBL:ACX96445.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobac
SCNpilot_BF_INOC_scaffold_388_12
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13592..14344
DNA (753bp) protein (251aa)
P-type conjugative transfer protein TrbJ n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L171_HALNC
Uncharacterized protein {ECO:0000313|EMBL:KGG84775.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Ps
P-type conjugative transfer protein TrbJ
SCNpilot_BF_INOC_scaffold_388_13
unknown

Not on your lists

14344..14682
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_388_14
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14679..16622
DNA (1944bp) protein (648aa)
TrbL/VirB6 plasmid conjugal transfer protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJ64_ACIAC
TrbL/VirB6 plasmid conjugal transfer protein rbh
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:ABM31002.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acid
SCNpilot_BF_INOC_scaffold_388_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16647..17360
DNA (714bp) protein (238aa)
Conjugal transfer protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1B8_HALNC
Conjugal transfer protein
Conjugal transfer protein {ECO:0000313|EMBL:ACX96491.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobac
SCNpilot_BF_INOC_scaffold_388_16
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17378..18469
DNA (1092bp) protein (364aa)
P-type conjugative transfer protein TrbG n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1B9_HALNC
P-type conjugative transfer protein TrbG
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:ACX96492.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" sour
SCNpilot_BF_INOC_scaffold_388_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18475..19809
DNA (1335bp) protein (445aa)
Conjugation TrbI family protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1C0_HALNC
conjugation TrbI family protein
Conjugation TrbI family protein {ECO:0000313|EMBL:ACX96493.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halot
SCNpilot_BF_INOC_scaffold_388_18
unknown

Not on your lists

19854..20243
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_388_19
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20191..20943
DNA (753bp) protein (251aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1C2_HALNC
Uncharacterized protein {ECO:0000313|EMBL:KHD17772.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacch
cobyrinic acid ac-diamide synthase
SCNpilot_BF_INOC_scaffold_388_20
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20993..22132
DNA (1140bp) protein (380aa)
ParB-like partition protein n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XER3_METSD
parB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:ACT52120.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus g
SCNpilot_BF_INOC_scaffold_388_21
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23157..24188)
DNA (1032bp) protein (344aa)
Replication initiator protein A n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GGY9_ALIDK
Replication initiator protein A
Uncharacterized protein {ECO:0000313|EMBL:EGY61119.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56F
SCNpilot_BF_INOC_scaffold_388_22
unknown

Not on your lists

comp(24268..24720)
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_388_23
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24724..24975)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VVL4_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM39692.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthale
SCNpilot_BF_INOC_scaffold_388_24

Not on your lists

comp(25139..25516)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q91UT7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAC79150.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_BF_INOC_scaffold_388_25
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25509..26180)
DNA (672bp) protein (224aa)
Resolvase, N terminal domain protein n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FM55_XANCI
Resolvase, N terminal domain protein {ECO:0000313|EMBL:CCG39442.1}; TaxID=1156940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xant
putative resolvase (resP)
SCNpilot_BF_INOC_scaffold_388_26
unknown

Not on your lists

comp(26299..26580)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_388_27
unknown

Not on your lists

comp(26577..26765)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_388_28
unknown

Not on your lists

comp(26744..27166)
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_388_29
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27224..27643)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa S54485 RepID=U9P7V2_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPH46920.1}; TaxID=1286094 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
SCNpilot_BF_INOC_scaffold_388_30
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27797..28402)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida RepID=V5WC62_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:AID37276.1}; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.
hypothetical protein
Displaying items 1-30 of 63 in total

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