ggKbase home page

SCNpilot_BF_INOC_scaffold_125

Search features with annotation key words

Displaying items 31-60 of 200 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_125_31
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

42708..43637
DNA (930bp) protein (310aa)
DNA uptake protein and related DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP71_NIAKG
DNA uptake protein and related DNA-binding protein
DNA uptake protein and related DNA-binding protein {ECO:0000313|EMBL:AEW03189.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" so
SCNpilot_BF_INOC_scaffold_125_32
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

43724..44065
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RCK5_CELLC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWH15253.1}; TaxID=1328323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga geojens
SCNpilot_BF_INOC_scaffold_125_33
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

44256..45641
DNA (1386bp) protein (462aa)
Trigger factor n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R1W5_OWEHD
trigger factor
Trigger factor {ECO:0000313|EMBL:AEV33915.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain
SCNpilot_BF_INOC_scaffold_125_34
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

45697..47004
DNA (1308bp) protein (436aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I4A2R0_ORNRL
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
MiaB-like tRNA modifying enzyme
SCNpilot_BF_INOC_scaffold_125_35
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47079..51098)
DNA (4020bp) protein (1340aa)
Putative type IIS restriction/modification enzyme n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7D0_PEDSD
type IIS restriction/modification enzyme
Tax=BJP_08E140C01_Bacteriodales_41_10
SCNpilot_BF_INOC_scaffold_125_36
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51231..52151)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035CBDEE
Uncharacterized protein {ECO:0000313|EMBL:KGE85371.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylib
hypothetical protein
SCNpilot_BF_INOC_scaffold_125_37
RBG_19FT_COMBO_Bacteroidetes_42_10_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52245..52961
DNA (717bp) protein (239aa)
3''''-5'''' exonuclease n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237CC81
DNA polymerase elongation subunit Tax=RBG_19FT_COMBO_Bacteroidetes_42_10_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_125_38
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

53032..53646
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDJ4_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43367.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviic
SCNpilot_BF_INOC_scaffold_125_39
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

53659..54240
DNA (582bp) protein (194aa)
tag; DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I n=1 Tax=Flavobacterium sp. F52 RepID=J1KR72_9FLAO
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:KIC63838.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseoba
SCNpilot_BF_INOC_scaffold_125_40
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

54316..54669
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CJT8_9FLAO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_125_41
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

54679..55443
DNA (765bp) protein (255aa)
3-oxo-5-alpha-steroid 4-dehydrogenase (EC:1.3.99.5) Tax=GWF2_Bacteroidetes_49_14_curated
3-oxo-5-alpha-steroid 4-dehydrogenase (EC:1.3.99.5)
3-oxo-5-alpha-steroid 4-dehydrogenase id=4132523 bin=GWF2_Bacteroidetes_49_14 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
SCNpilot_BF_INOC_scaffold_125_42
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

55499..55873
DNA (375bp) protein (125aa)
Endoribonuclease L-PSP; K15067 2-aminomuconate deaminase [EC:3.5.99.5] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Endoribonuclease L-PSP n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBD8_FLUTR
endoribonuclease L-PSP
SCNpilot_BF_INOC_scaffold_125_43
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

55915..57147
DNA (1233bp) protein (411aa)
HD superfamily phosphohydrolase n=1 Tax=Polaribacter sp. MED152 RepID=A2U223_9FLAO
HD superfamily phosphohydrolase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
HD superfamily phosphohydrolase
SCNpilot_BF_INOC_scaffold_125_44
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(57144..58217)
DNA (1074bp) protein (358aa)
Collagen triple helix repeat-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9B3_FLUTR
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Collagen triple helix repeat-containing protein
SCNpilot_BF_INOC_scaffold_125_45
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(58310..58930)
DNA (621bp) protein (207aa)
Glycosyl transferase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YWC8_MELRP
glycosyl transferase
Tax=BJP_IG2069_Ignavibacteriae_38_11
SCNpilot_BF_INOC_scaffold_125_46
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59017..59829)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036BB874
Transport protein TonB {ECO:0000313|EMBL:KHJ37112.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucos
TonB family protein
SCNpilot_BF_INOC_scaffold_125_47
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59882..60469)
DNA (588bp) protein (196aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRN2_CHIPD
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ACU58925.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chi
SCNpilot_BF_INOC_scaffold_125_48
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(60497..61126)
DNA (630bp) protein (210aa)
Biopolymertransporter ExbD/TolR n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FI96_9BACT id=720856 bin=RAAC39 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria
biopolymer transporter ExbD
Biopolymer transporter ExbD {ECO:0000313|EMBL:AKD02511.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
SCNpilot_BF_INOC_scaffold_125_49
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(61154..61975)
DNA (822bp) protein (274aa)
flagellar motor protein MotA n=1 Tax=Spirosoma luteum RepID=UPI00037932C1
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:CCH56894.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
flagellar motor protein MotA
SCNpilot_BF_INOC_scaffold_125_50
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

62353..62958
DNA (606bp) protein (202aa)
Para-aminobenzoate synthase glutamine amidotransferase component II {ECO:0000313|EMBL:EMR03753.1}; EC=2.6.1.85 {ECO:0000313|EMBL:EMR03753.1};; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagi
para-aminobenzoate synthase (EC:2.6.1.85)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000368AD0A
SCNpilot_BF_INOC_scaffold_125_51
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(62973..64676)
DNA (1704bp) protein (568aa)
peptidase M1 n=1 Tax=Psychroflexus tropicus RepID=UPI000361AE9B
aminopeptidase N Tax=GWA2_Ignavibacteria_54_16_curated
aminopeptidase N
SCNpilot_BF_INOC_scaffold_125_52
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

64773..66008
DNA (1236bp) protein (412aa)
Phosphohydrolase, MutT family n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11WV2_CYTH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII51312.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
SCNpilot_BF_INOC_scaffold_125_53
unknown

Not on your lists

comp(66045..66257)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_125_54
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(66283..67209)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFN8_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63450.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
SCNpilot_BF_INOC_scaffold_125_55
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(67449..68690)
DNA (1242bp) protein (414aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
nuoD; NADH dehydrogenase I subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z5Y2_FLABF
SCNpilot_BF_INOC_scaffold_125_56
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(68759..69289)
DNA (531bp) protein (177aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit
nuoC; NADH-quinone oxidoreductase, C subunit (EC:1.6.5.3)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000376FB0F
SCNpilot_BF_INOC_scaffold_125_57
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(69303..69842)
DNA (540bp) protein (180aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit
NADH dehydrogenase (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=NUOB_FLAPJ
SCNpilot_BF_INOC_scaffold_125_58
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(69917..70282)
DNA (366bp) protein (122aa)
nuoA; NADH dehydrogenase I subunit A (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH-quinone oxidoreductase subunit A n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00036C5581
SCNpilot_BF_INOC_scaffold_125_59
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

70555..71436
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KP27_SOLCM
site-specific recombinase XerD Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
site-specific recombinase XerD
SCNpilot_BF_INOC_scaffold_125_60
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

71501..71905
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NT53_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJS05891.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
Displaying items 31-60 of 200 in total

View Taxonomy