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SCNpilot_BF_INOC_scaffold_125

Search features with annotation key words

Displaying items 181-200 of 200 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_125_181
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

213805..214431
DNA (627bp) protein (209aa)
Uridine kinase {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007563}; EC=2.7.1.48 {ECO:0000256|RuleBase:RU003825};; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales;
uridine kinase (EC:2.7.1.48)
Uridine kinase id=4017034 bin=GWF2_Bacteroidetes_35_48 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
SCNpilot_BF_INOC_scaffold_125_182
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(214454..214924)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037B4555
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1524460 species="Bacteri
SCNpilot_BF_INOC_scaffold_125_183
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

215084..216124
DNA (1041bp) protein (347aa)
glycerol 3-phosphate dehydrogenase (nad(p)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TR71_MARTH
SCNpilot_BF_INOC_scaffold_125_184
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

216195..217082
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KMY0_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD09059.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadens
SCNpilot_BF_INOC_scaffold_125_185
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

217087..217482
DNA (396bp) protein (132aa)
Protein translocase, SecG subunit n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KMX9_SOLCM
protein translocase subunit SecG
Protein translocase, SecG subunit {ECO:0000313|EMBL:AFD09058.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.
SCNpilot_BF_INOC_scaffold_125_186
Campylobacter hyointestinalis, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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217654..218154
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:KEA43940.1}; TaxID=91352 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobact
cation diffusion facilitator family transporter id=4379147 bin=GWA2_Bacteroidetes_A19_40_15 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
cation diffusion facilitator family transporter
SCNpilot_BF_INOC_scaffold_125_187
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

218168..218428
DNA (261bp) protein (87aa)
Smr protein/MutS2 id=2477776 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Smr protein/MutS2 Tax=GWA2_Bacteroidetes_32_17_curated
Smr protein/MutS2
SCNpilot_BF_INOC_scaffold_125_188
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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218425..219144
DNA (720bp) protein (240aa)
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Pseudouridine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT0_NIAKG
pseudouridine synthase
SCNpilot_BF_INOC_scaffold_125_189
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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219173..220078
DNA (906bp) protein (302aa)
ABC transporter related n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PVA3_CHIPD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACU64696.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
SCNpilot_BF_INOC_scaffold_125_190
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

220075..221394
DNA (1320bp) protein (440aa)
ABC transporter, permease protein, putative n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6V5_DYAFD
ABC transporter permease
ABC transporter, permease protein, putative {ECO:0000313|EMBL:ACT96166.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" sou
SCNpilot_BF_INOC_scaffold_125_191
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

221595..223493
DNA (1899bp) protein (633aa)
Uncharacterized protein n=5 Tax=Mycobacterium tuberculosis RepID=M9UUH2_MYCTU
hypothetical protein
Serine esterase {ECO:0000313|EMBL:AIH42108.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacte
SCNpilot_BF_INOC_scaffold_125_192
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(223486..223971)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034C69ED
Phenylacetate-CoA oxygenase, paaj subunit {ECO:0000313|EMBL:EJF11037.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp.
phenylacetate-CoA oxygenase, paaj subunit
SCNpilot_BF_INOC_scaffold_125_193
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(223981..226254)
DNA (2274bp) protein (758aa)
Two component regulator propeller n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI4_NIAKG
Two component regulator propeller
Two component regulator propeller {ECO:0000313|EMBL:AEW01972.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;"
SCNpilot_BF_INOC_scaffold_125_194
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(226324..227586)
DNA (1263bp) protein (421aa)
fumarylacetoacetate hydrolase (EC:3.7.1.2)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000345DDD6
Fumarylacetoacetase {ECO:0000313|EMBL:KIF30641.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
SCNpilot_BF_INOC_scaffold_125_195
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(227674..228639)
DNA (966bp) protein (322aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FKP1_9BACT
TIM-barrel fold metal-dependent hydrolase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
SCNpilot_BF_INOC_scaffold_125_196
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(229163..229468)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1LJQ1_9BACT
ribosomal subunit interface protein
Uncharacterized protein {ECO:0000313|EMBL:EKB50553.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
SCNpilot_BF_INOC_scaffold_125_197
unknown

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229565..229768
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_125_198
unknown

Not on your lists

230058..230264
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_125_199
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

230429..231625
DNA (1197bp) protein (399aa)
tuf; elongation factor Tu (EC:3.6.5.3)
elongation factor Tu n=1 Tax=Dyadobacter beijingensis RepID=UPI00037B8279
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytoph
SCNpilot_BF_INOC_scaffold_125_200

Not on your lists

231748..232470
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00036D6E2C
Marine sediment metagenome DNA, contig: S01H4_S07119 {ECO:0000313|EMBL:GAG94054.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Displaying items 181-200 of 200 in total

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