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SCNpilot_BF_INOC_scaffold_143

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_143_1
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

593..2401
DNA (1809bp) protein (603aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHQ8_FLUTR
Secreted and surface protein containing fasciclin-like repeats {ECO:0000313|EMBL:GAO31885.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_143_2
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


2446..3258
DNA (813bp) protein (271aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VJF1_9SPHI
ribosomal RNA small subunit methyltransferase A
SCNpilot_BF_INOC_scaffold_143_3
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3264..3839
DNA (576bp) protein (192aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZQX7_9BACT
phosphoribosylglycinamide formyltransferase
SCNpilot_BF_INOC_scaffold_143_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3885..4598
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003732046
Crp/Fnr family transcriptional regulator Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Crp/Fnr family transcriptional regulator
SCNpilot_BF_INOC_scaffold_143_5
unknown

Not on your lists

4690..5145
DNA (456bp) protein (152aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_143_6
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

comp(5163..6986)
DNA (1824bp) protein (608aa)
multidrug ABC transporter ATPase and permease; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=GWE2_Bacteroidetes_29_8_curated
ABC-type multidrug transport system, ATPase and permease component id=2082097 bin=GWE2_Bacteroidetes_29_8 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
multidrug ABC transporter ATPase and permease
SCNpilot_BF_INOC_scaffold_143_7
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7042..9057)
DNA (2016bp) protein (672aa)
OmpA/MotB domain-containing protein Tax=GWA2_Bacteroidetes_31_9_curated
OmpA/MotB domain protein id=4154347 bin=GWF2_Bacteroidetes_33_38 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
OmpA/MotB domain-containing protein
SCNpilot_BF_INOC_scaffold_143_8
Leptospira meyeri, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9157..9513
DNA (357bp) protein (119aa)
ptpS; 6-pyruvoyl tetrahydrobiopterin synthase (EC:4.2.3.12)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1218585 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae;
6-carboxy-5,6,7,8-tetrahydropterin synthase n=2 Tax=Leptospira meyeri RepID=K5CC18_LEPME
SCNpilot_BF_INOC_scaffold_143_9
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9730..12624
DNA (2895bp) protein (965aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine d
Glycine dehydrogenase (decarboxylating) n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KY67_HALH1
glycine dehydrogenase
SCNpilot_BF_INOC_scaffold_143_10
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13071..13544
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0003738DB5
Uncharacterized protein {ECO:0000313|EMBL:GAE64638.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
N-acetyltransferase GCN5
SCNpilot_BF_INOC_scaffold_143_11
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13563..14183)
DNA (621bp) protein (207aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niabella soli DSM 19437 RepID=H1NM69_9SPHI
LuxR family transcriptional regulator
Tax=BJP_08E140C01_Flavobacteriales_35_8
SCNpilot_BF_INOC_scaffold_143_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14185..16158)
DNA (1974bp) protein (658aa)
Histidine kinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NM68_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17270.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
SCNpilot_BF_INOC_scaffold_143_13
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16334..17755
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJC5_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA46022.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviic
SCNpilot_BF_INOC_scaffold_143_14
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(17951..18205)
DNA (255bp) protein (85aa)
Acyl carrier protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JQS3_9BACT
phosphopantetheine-binding protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
phosphopantetheine-binding protein
SCNpilot_BF_INOC_scaffold_143_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18219..19421)
DNA (1203bp) protein (401aa)
Beta-ketoacyl synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAX9_CHIPD
beta-ketoacyl synthase
Beta-ketoacyl synthase {ECO:0000313|EMBL:ACU59351.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinens
SCNpilot_BF_INOC_scaffold_143_16
Gramella forsetii, Gramella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19526..20692)
DNA (1167bp) protein (389aa)
rsmB; ribosomal RNA small subunit methyltransferase B (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B {ECO:0000313|EMBL:CAL66026.1}; EC=2.1.1.- {ECO:0000313|EMBL:CAL66026.1};; TaxID=411154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriale
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M081_GRAFK
SCNpilot_BF_INOC_scaffold_143_17
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20692..22449)
DNA (1758bp) protein (586aa)
Protease 4 {ECO:0000313|EMBL:KHJ38797.1}; EC=3.4.21.- {ECO:0000313|EMBL:KHJ38797.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobac
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002E1073D
signal peptide peptidase SppA, 67K type
SCNpilot_BF_INOC_scaffold_143_18
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22502..22999
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003627B46
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:AKD05240.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;
SCNpilot_BF_INOC_scaffold_143_19
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23042..24328)
DNA (1287bp) protein (429aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingo
citrate synthase I (EC:2.3.3.1)
Citrate synthase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7Z5_PEDSD
SCNpilot_BF_INOC_scaffold_143_20
Galdieria sulphuraria, Galdieria, Cyanidiales, Bangiophyceae, Eukaryota

Not on your lists

comp(24513..25811)
DNA (1299bp) protein (433aa)
D-arabinono-1,4-lactone oxidase {ECO:0000313|EMBL:EME30498.1}; EC=1.1.3.37 {ECO:0000313|EMBL:EME30498.1};; TaxID=130081 species="Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; Galdie
D-arabinono-1,4-lactone oxidase n=1 Tax=Galdieria sulphuraria RepID=M2Y3E6_GALSU
FAD/FMN-containing dehydrogenase
SCNpilot_BF_INOC_scaffold_143_21
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25923..26633
DNA (711bp) protein (237aa)
YpdC n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L3K6_SAPGL
hypothetical protein
YpdC {ECO:0000313|EMBL:AFC24954.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;"
SCNpilot_BF_INOC_scaffold_143_22
unknown

Not on your lists

comp(26614..28095)
DNA (1482bp) protein (494aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_143_23
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28239..28952
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MKX6_9SPHI
DedA family protein {ECO:0000313|EMBL:KGE14678.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacteri
hypothetical protein
SCNpilot_BF_INOC_scaffold_143_24
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

29030..30007
DNA (978bp) protein (326aa)
Putative uncharacterized protein id=1763504 bin=GWE2_Bacteroidetes_29_8 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein Tax=GWE2_Bacteroidetes_29_8_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_143_25
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30078..30773)
DNA (696bp) protein (232aa)
3-oxoacid CoA-transferase subunit A (EC:2.8.3.5)
3-oxoacid CoA-transferase, A subunit {ECO:0000313|EMBL:ACU05116.1}; EC=2.8.3.5 {ECO:0000313|EMBL:ACU05116.1};; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphi
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Pedobacter agri RepID=UPI000299F78C
SCNpilot_BF_INOC_scaffold_143_26
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30799..31590)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002F66C79
Uncharacterized protein {ECO:0000313|EMBL:KJS07208.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_143_27
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31587..32330)
DNA (744bp) protein (248aa)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000313|EMBL:CEN43717.1}; EC=3.6.1.- {ECO:0000313|EMBL:CEN43717.1};; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacte
UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-)
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Capnocytophaga sp. oral taxon 336 str. F0502 RepID=S3CL23_9FLAO
SCNpilot_BF_INOC_scaffold_143_28
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32369..32767)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037678E9
lactoylglutathione lyase-like lyase Tax=GWF2_Bacteroidetes_38_335_curated
lactoylglutathione lyase-like lyase
SCNpilot_BF_INOC_scaffold_143_29
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32771..34771)
DNA (2001bp) protein (667aa)
OmpA/MotB domain protein id=4982534 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
OmpA/MotB domain-containing protein Tax=GWA2_Bacteroidetes_32_17_curated
OmpA/MotB domain-containing protein
SCNpilot_BF_INOC_scaffold_143_30
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34925..36208
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00030FDD0A
Uncharacterized protein {ECO:0000313|EMBL:KHJ38790.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter gluco
hypothetical protein
Displaying items 1-30 of 106 in total

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