ggKbase home page

SCNpilot_BF_INOC_scaffold_246

Search features with annotation key words

Displaying items 1-30 of 95 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_246_1
unknown

Not on your lists

87..323
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_246_2
unknown

Not on your lists

327..800
DNA (474bp) protein (158aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_246_3
unknown

Not on your lists

912..1328
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_246_4
unknown

Not on your lists

1339..1563
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_246_5
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1639..3378
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T955_NIAKG
hypothetical protein Tax=GWA2_Bacteroidetes_30_7_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_246_6
unknown

Not on your lists

3380..3760
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_246_7
unknown

Not on your lists

3839..4261
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_246_8
unknown

Not on your lists

4276..4569
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_246_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4526..4867
DNA (342bp) protein (114aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AK18_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84919.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae
secreted trypsin-like lysyl endopeptidase, Por secretion system C-terminal sorting domain protein
SCNpilot_BF_INOC_scaffold_246_10
unknown

Not on your lists

4911..5528
DNA (618bp) protein (206aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_246_11
unknown

Not on your lists

5679..6182
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_246_12
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6163..6339
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VJW5_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK58571.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
SCNpilot_BF_INOC_scaffold_246_13
unknown

Not on your lists

6345..6725
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_246_14
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7061..7678
DNA (618bp) protein (206aa)
manganese/iron superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=GWF2_Bacteroidetes_41_31_curated
Superoxide dismutase id=3956060 bin=GWF2_Bacteroidetes_41_31 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
manganese/iron superoxide dismutase
SCNpilot_BF_INOC_scaffold_246_15
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7781..8500
DNA (720bp) protein (240aa)
Cytoplasmic membrane protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZJ71_9BACT
Cytoplasmic membrane protein {ECO:0000313|EMBL:EAY29607.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134
YhhN family protein
SCNpilot_BF_INOC_scaffold_246_16
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8525..9616
DNA (1092bp) protein (364aa)
Glycosyltransferase n=1 Tax=Saprospira grandis DSM 2844 RepID=J0P2Q0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KGE89696.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylib
group 1 glycosyl transferase
SCNpilot_BF_INOC_scaffold_246_17
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9597..10727
DNA (1131bp) protein (377aa)
hypothetical protein Tax=GWB2_Bacteroidetes_41_8_curated
Putative mannosyltransferase id=4330713 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_BF_INOC_scaffold_246_18
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(10734..13511)
DNA (2778bp) protein (926aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
Uncharacterized protein id=3651326 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_BF_INOC_scaffold_246_19
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13704..15347
DNA (1644bp) protein (548aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037AC6DC
Nucleotide pyrophosphatase {ECO:0000313|EMBL:KIA90814.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter ky
type I phosphodiesterase/nucleotide pyrophosphatase
SCNpilot_BF_INOC_scaffold_246_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15361..16068)
DNA (708bp) protein (236aa)
Methyltransferase type 12 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIH8_NIAKG
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:AEW01794.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis
SCNpilot_BF_INOC_scaffold_246_21
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(16187..17185)
DNA (999bp) protein (333aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R1J6_OWEHD
putative glycoprotease GCP
SCNpilot_BF_INOC_scaffold_246_22
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17259..22064
DNA (4806bp) protein (1602aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEE2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63351.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
SCNpilot_BF_INOC_scaffold_246_23
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22076..22597)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000381B690
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CEA15765.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porp
SCNpilot_BF_INOC_scaffold_246_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22799..25738)
DNA (2940bp) protein (980aa)
Excinuclease ABC, A subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC31_CHIPD
excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pin
SCNpilot_BF_INOC_scaffold_246_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

25853..27124
DNA (1272bp) protein (424aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F3XZ94_9FLAO
hypothetical protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_246_26
unknown

Not on your lists

27248..28576
DNA (1329bp) protein (443aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_246_27
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28644..29681
DNA (1038bp) protein (346aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1288963 species="Bacteri
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZTD5_9BACT
SCNpilot_BF_INOC_scaffold_246_28
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29659..30882
DNA (1224bp) protein (408aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Pontibacter roseus RepID=UPI0003657564
EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
SCNpilot_BF_INOC_scaffold_246_29
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30888..33098)
DNA (2211bp) protein (737aa)
Uncharacterized protein n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L2Q0_SAPGL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC24807.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (st
SCNpilot_BF_INOC_scaffold_246_30
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33105..33977)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037FE94F
Uncharacterized protein {ECO:0000313|EMBL:KGE88626.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylib
Outer membrane protein Omp28
Displaying items 1-30 of 95 in total

View Taxonomy