ggKbase home page

SCNpilot_BF_INOC_scaffold_37

Search features with annotation key words

Displaying items 211-240 of 280 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_37_211
unknown

Not on your lists

274174..274890
DNA (717bp) protein (239aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_37_212
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(274880..275482)
DNA (603bp) protein (201aa)
4''''-phosphopantetheinyl transferase n=1 Tax=Pedobacter agri RepID=UPI00029AE9B9
4'-phosphopantetheinyl transferase
Tax=BJP_IG2102_Bacteroidetes_40_9
SCNpilot_BF_INOC_scaffold_37_213
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(275482..276165)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Saprospira grandis DSM 2844 RepID=J1I6W6_9SPHI
PorT protein
PorT protein {ECO:0000313|EMBL:AFC23652.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin)
SCNpilot_BF_INOC_scaffold_37_214
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(276175..276915)
DNA (741bp) protein (247aa)
Ubiquinone/menaquinone biosynthesis methyltransferase ubiE; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
demethylmenaquinone methyltransferase (EC:2.1.1.-)
Ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5C9H0_9BACT
SCNpilot_BF_INOC_scaffold_37_215
Bacteroides sp. CAG:709, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(276996..277664)
DNA (669bp) protein (223aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBas
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003688E20
uracil-DNA glycosylase
SCNpilot_BF_INOC_scaffold_37_216
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(277770..278114)
DNA (345bp) protein (115aa)
50S ribosomal protein L20 n=2 Tax=Saprospira grandis RepID=H6L6F0_SAPGL
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales
rplT; 50S ribosomal protein L20
SCNpilot_BF_INOC_scaffold_37_217
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(278148..278384)
DNA (237bp) protein (79aa)
50S ribosomal protein L35 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THU2_NIAKG
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Fla
50S ribosomal protein L35P
SCNpilot_BF_INOC_scaffold_37_218
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

278579..280453
DNA (1875bp) protein (625aa)
Chaperone protein HtpG n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JPE9_9BACT
Chaperone protein HtpG {ECO:0000256|SAAS:SAAS00218406}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
heat shock protein hsp90
SCNpilot_BF_INOC_scaffold_37_219
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(280524..281483)
DNA (960bp) protein (320aa)
Arginase/agmatinase/formiminoglutamase; K01476 arginase [EC:3.5.3.1] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Arginase/agmatinase/formiminoglutamase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYP1_PEDHD
Arginase/agmatinase/formiminoglutamase
SCNpilot_BF_INOC_scaffold_37_220
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(281614..281991)
DNA (378bp) protein (126aa)
Transcriptional regulator n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JYF4_9BACT
Transcriptional regulator {ECO:0000313|EMBL:ELR73800.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
transcriptional regulator
SCNpilot_BF_INOC_scaffold_37_221
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

282089..284482
DNA (2394bp) protein (798aa)
aminopeptidase N; K01256 aminopeptidase N [EC:3.4.11.2] id=7718927 bin=BACIGN_2 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
aminopeptidase N
Tax=BJP_IG2069_Ignavibacteriae_38_11
SCNpilot_BF_INOC_scaffold_37_222
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

284479..285390
DNA (912bp) protein (304aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
tRNA dimethylallyltransferase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXW1_SOLCM
tRNA isopentenyltransferase MiaA
SCNpilot_BF_INOC_scaffold_37_223
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

285478..287658
DNA (2181bp) protein (727aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphin
Ribonuclease R n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAC9_CHIPD
ribonuclease R
SCNpilot_BF_INOC_scaffold_37_224
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(287679..289277)
DNA (1599bp) protein (533aa)
Copper type II ascorbate-dependent monooxygenase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KTF0_HALH1
Copper type II ascorbate-dependent monooxygenase
Copper type II ascorbate-dependent monooxygenase {ECO:0000313|EMBL:AEE52364.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;
SCNpilot_BF_INOC_scaffold_37_225
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

289443..291251
DNA (1809bp) protein (603aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEW02720.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEW02720.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagacea
Butyryl-CoA dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG81_NIAKG
butyryl-CoA dehydrogenase
SCNpilot_BF_INOC_scaffold_37_226
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

291453..291884
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FWM8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KGE13902.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
cytochrome C biogenesis protein
SCNpilot_BF_INOC_scaffold_37_227
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(292112..293506)
DNA (1395bp) protein (465aa)
Phosphoglucosamine mutase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XT65_PEDHD
Phosphoglucosamine mutase {ECO:0000313|EMBL:KIA91551.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyu
phosphoglucosamine mutase
SCNpilot_BF_INOC_scaffold_37_228
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

293583..294320
DNA (738bp) protein (246aa)
Methyltransferase type 11 n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SAK7_PEDSD
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ADY52627.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudoped
SCNpilot_BF_INOC_scaffold_37_229
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

294364..295023
DNA (660bp) protein (220aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGI7_NIAKG
Peptide methionine sulfoxide reductase msrA
SCNpilot_BF_INOC_scaffold_37_230
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

295089..296966
DNA (1878bp) protein (626aa)
glycosyl transferase n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0003041748
glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
glycosyl transferase
SCNpilot_BF_INOC_scaffold_37_231
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

297076..297336
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0003198981
hypothetical protein Tax=GWF2_Bacteroidetes_35_48_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_37_232
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

297336..298172
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003768037
Putative methyltransferase {ECO:0000313|EMBL:GAO44294.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumiba
Thiopurine S-methyltransferase (TPMT)
SCNpilot_BF_INOC_scaffold_37_233
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

298184..298495
DNA (312bp) protein (104aa)
Rhodanese-like protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID78_FLUTR
Rhodanese-like protein
Rhodanese-like protein {ECO:0000313|EMBL:AEA45493.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strai
SCNpilot_BF_INOC_scaffold_37_234
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

298503..298763
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KRW5_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE50069.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
SCNpilot_BF_INOC_scaffold_37_235
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

298767..299081
DNA (315bp) protein (105aa)
Thioredoxin n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5W4_SPHS2
thioredoxin
Thioredoxin {ECO:0000313|EMBL:ADZ80129.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (s
SCNpilot_BF_INOC_scaffold_37_236
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(299084..299449)
DNA (366bp) protein (122aa)
UPF0102 protein Runsl_1319 n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ECE4_RUNSL
hypothetical protein
UPF0102 protein Runsl_1319 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain AT
SCNpilot_BF_INOC_scaffold_37_237
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(299453..300760)
DNA (1308bp) protein (436aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:ADR21455.1}; EC=1.1.1.22 {ECO:0000313|EMBL:ADR21455.1};; Flags: Precursor;; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Fl
Nucleotide sugar dehydrogenase n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TNL8_MARTH
SCNpilot_BF_INOC_scaffold_37_238
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(300770..301906)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000345DDA0
putative PLP-dependent enzyme possibly involved in cell wall biogenesis Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
DegT/DnrJ/EryC1/StrS aminotransferase
SCNpilot_BF_INOC_scaffold_37_239
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

301958..302725
DNA (768bp) protein (256aa)
hypothetical protein Tax=CG_Bacteroid_01
Putative uncharacterized protein id=4573285 bin=GWF2_Bacteroidetes_41_31 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_BF_INOC_scaffold_37_240
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

302990..303679
DNA (690bp) protein (230aa)
Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYW7_DYAFD
succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family
Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family {ECO:0000313|EMBL:ACT95173.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophaga
Displaying items 211-240 of 280 in total

View Taxonomy