ggKbase home page

SCNpilot_BF_INOC_scaffold_37_216

Organism: SCNpilot_BF_INOC_Bacteroidetes_37_82

near complete RP 52 / 55 BSCG 49 / 51 ASCG 14 / 38
Location: comp(277770..278114)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=2 Tax=Saprospira grandis RepID=H6L6F0_SAPGL similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 114.0
  • Bit_score: 168
  • Evalue 5.30e-39
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 114.0
  • Bit_score: 170
  • Evalue 1.90e-39
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 114.0
  • Bit_score: 168
  • Evalue 1.50e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacteriales bacterium BRH_c54 → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 345
ATGCCACGTTCAGTAAATTCGGTTGCCAGTCGTGCACGTAGAAAAAAAGTATTAAAAAGCGCGAAAGGTTATTTCCTTTCTCGTAGCAAGGTTTATACAGTAGCTAAAAACGCTGTTGAAAAAGCAGGTTTATATGCTTATGTAGGCAGAAAACGTAAGAAAAGAGACTTCCGTTCATTGTGGATAGCACGTATAAATGCAGCAGTTCGCGAAGAAGGTTTGTCATATTCAAAATTTATTGCTAAACTTGCAGATAAAGGAATTGAGTTGAACAGAAAAGTATTAGCTGATTTGGCTCTTAATAATCCTGAAGCGTTCAAAGCTATTGTAGCTCAAGTAAAATAA
PROTEIN sequence
Length: 115
MPRSVNSVASRARRKKVLKSAKGYFLSRSKVYTVAKNAVEKAGLYAYVGRKRKKRDFRSLWIARINAAVREEGLSYSKFIAKLADKGIELNRKVLADLALNNPEAFKAIVAQVK*