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SCNpilot_BF_INOC_scaffold_72

Search features with annotation key words

Displaying items 121-143 of 143 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_72_121
unknown

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comp(144461..144724)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_72_122
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(144744..146216)
DNA (1473bp) protein (491aa)
RNA polymerase, sigma 54 subunit, RpoN n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK09_CHIPD
RNA polymerase sigma54 factor {ECO:0000313|EMBL:KIC94813.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihum
RNA polymerase sigma-54 subunit RpoN
SCNpilot_BF_INOC_scaffold_72_123
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

146382..147224
DNA (843bp) protein (281aa)
cell division protein FtsQ n=1 Tax=Pedobacter agri RepID=UPI00029A5AC1
Cell division protein FtsQ {ECO:0000313|EMBL:KIA95068.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter ky
hypothetical protein
SCNpilot_BF_INOC_scaffold_72_124
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

147238..148641
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Flavobacterium sp. MS220-5C RepID=UPI0003487E43
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
cell division protein FtsA
SCNpilot_BF_INOC_scaffold_72_125
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

148679..150454
DNA (1776bp) protein (592aa)
Cell division protein FtsZ n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRE4_CHIPD
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriale
cell division protein FtsZ
SCNpilot_BF_INOC_scaffold_72_126
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

150630..151430
DNA (801bp) protein (267aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
Pyrroline-5-carboxylate reductase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L2C2_HALH1
pyrroline-5-carboxylate reductase
SCNpilot_BF_INOC_scaffold_72_127
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

151548..152597
DNA (1050bp) protein (350aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IK25_FLUTR
S-adenosylmethionine--tRNA ribosyltransferase-isomerase
SCNpilot_BF_INOC_scaffold_72_128
unknown

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152612..153022
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_72_129
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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153123..155828
DNA (2706bp) protein (902aa)
Conserved repeat domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUT6_CHIPD
hypothetical protein
Conserved repeat domain protein {ECO:0000313|EMBL:ACU61084.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;"
SCNpilot_BF_INOC_scaffold_72_130
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

155857..156801
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PA82_CHIPD
hypothetical protein Tax=GWB2_Bacteroidetes_41_8_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_72_131
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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156842..159157
DNA (2316bp) protein (772aa)
OmpA/MotB domain protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ENR3_RUNSL
OmpA/MotB domain-containing protein Tax=GWA2_Bacteroidetes_31_9_curated
OmpA/MotB domain-containing protein
SCNpilot_BF_INOC_scaffold_72_132
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

159277..160164
DNA (888bp) protein (296aa)
(acyl-carrier-protein) s-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales;
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T299_PALPW
SCNpilot_BF_INOC_scaffold_72_133
Tamlana nanhaiensis, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

160180..160914
DNA (735bp) protein (245aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI000363E0E3
pantothenate kinase, type III
SCNpilot_BF_INOC_scaffold_72_134
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(160911..163067)
DNA (2157bp) protein (719aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII50364.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
A540L (Fragment) id=4631698 bin=GWC2_Bacteroidetes_40_13 species=uncultured bacterium pFosLip genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_72_135
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(163264..166131)
DNA (2868bp) protein (956aa)
Excinuclease ABC, A subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PP08_CHIPD
excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pin
SCNpilot_BF_INOC_scaffold_72_136
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

166308..166736
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EZS3_EMTOG
Protein of unknown function DUF2147
Uncharacterized protein {ECO:0000313|EMBL:AFK05176.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotr
SCNpilot_BF_INOC_scaffold_72_137
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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166742..167164
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI000378FB7B
ubiA; hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCH03636.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_BF_INOC_scaffold_72_138
RIFOXYD1_FULL_OD1_Magasanikbacteria_40_23_curated, Magasanikbacteria, Parcubacteria, Bacteria

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167161..167808
DNA (648bp) protein (216aa)
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RH97_9CYAN
haloacid dehalogenase superfamily protein
haloacid dehalogenase superfamily protein Tax=RIFOXYD1_FULL_OD1_Magasanikbacteria_40_23_curated
SCNpilot_BF_INOC_scaffold_72_139
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

167871..169046
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00036DEED2
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
SCNpilot_BF_INOC_scaffold_72_140
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(169119..169685)
DNA (567bp) protein (189aa)
Cytochrome B561 n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FBE0_FLAJ1
cytochrome B561
Cytochrome B561 {ECO:0000313|EMBL:ABQ07471.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (
SCNpilot_BF_INOC_scaffold_72_141
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(169701..170126)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2QH34_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKF54057.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_72_142
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

170367..175532
DNA (5166bp) protein (1722aa)
PKD domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Cell wall surface anchor family protein id=1850634 bin=GWE2_Bacteroidetes_42_42 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
psrP1; cell wall surface anchor family protein
SCNpilot_BF_INOC_scaffold_72_143
unknown

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175529..176398
DNA (870bp) protein (290aa)

This feature has no annotations

Displaying items 121-143 of 143 in total

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