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SCNpilot_BF_INOC_scaffold_934

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_934_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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317..3244
DNA (2928bp) protein (976aa)
Conserved repeat domain protein n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L034_SAPGL
PDK repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_934_2
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3284..3820
DNA (537bp) protein (179aa)
Isopentenyl-diphosphate delta-isomerase {ECO:0000313|EMBL:EPR72005.1}; EC=5.3.3.2 {ECO:0000313|EMBL:EPR72005.1};; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavo
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VP33_9FLAO
SCNpilot_BF_INOC_scaffold_934_3
Blattabacterium sp. (Panesthia angustipennis spadica), Blattabacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3827..5206)
DNA (1380bp) protein (460aa)
Glutamate/aspartate:proton symporter n=1 Tax=Blattabacterium sp. (Panesthia angustipennis spadica) str. BPAA RepID=M5ADF3_9FLAO
gltP; glutamate/aspartate:proton symporter
Glutamate/aspartate:proton symporter {ECO:0000313|EMBL:BAM99579.1}; TaxID=1229512 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Blattabacteriaceae; Blattabacterium.;" source="Bla
SCNpilot_BF_INOC_scaffold_934_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5318..5629
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003672000
YHS domain-containing protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
YHS domain-containing protein
SCNpilot_BF_INOC_scaffold_934_5
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5639..6640
DNA (1002bp) protein (334aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FF31_9BACT
3-oxoacyl-ACP synthase
SCNpilot_BF_INOC_scaffold_934_6
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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6763..9288
DNA (2526bp) protein (842aa)
TonB-dependent receptor plug id=2614396 bin=GWF2_Bacteroidetes_43_11 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
tonb-dependent receptor plug Tax=GWF2_Bacteroidetes_43_11_curated
TonB-dependent receptor
SCNpilot_BF_INOC_scaffold_934_7
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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9359..10588
DNA (1230bp) protein (410aa)
Parallel beta-helix repeat-containing protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ECW5_RUNSL
parallel beta-helix repeat-containing protein
Parallel beta-helix repeat-containing protein {ECO:0000313|EMBL:AEI48437.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" sourc
SCNpilot_BF_INOC_scaffold_934_8
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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11173..12324
DNA (1152bp) protein (384aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZZ2_HALH1
Na(+)/H(+) antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family Tax=CG_Maritim_01
Na(+)/H(+) antiporter NhaA
SCNpilot_BF_INOC_scaffold_934_9
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12329..13618
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S3F3_9FLAO
hypothetical protein Tax=CG_Maritim_01
hypothetical protein
SCNpilot_BF_INOC_scaffold_934_10
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14002..15483)
DNA (1482bp) protein (494aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7XH15_9BACT
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EMS33828.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Marin
two component, sigma54 specific, Fis family transcriptional regulator
SCNpilot_BF_INOC_scaffold_934_11
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15635..16981
DNA (1347bp) protein (449aa)
Helicase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EER0_RUNSL
helicase
Helicase {ECO:0000313|EMBL:AEI48259.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC
SCNpilot_BF_INOC_scaffold_934_12
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17278..18393
DNA (1116bp) protein (372aa)
RNA-directed DNA polymerase {ECO:0000313|EMBL:AEI48257.1}; EC=2.7.7.49 {ECO:0000313|EMBL:AEI48257.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;
RNA-directed DNA polymerase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EEQ8_RUNSL
RNA-directed DNA polymerase
SCNpilot_BF_INOC_scaffold_934_13
unknown

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18395..19099
DNA (705bp) protein (235aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_934_14
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19158..19970
DNA (813bp) protein (271aa)
KilA-N domain-containing protein n=1 Tax=Treponema sp. JC4 RepID=I0X8C5_9SPIO
kila, N-terminal/apses-type hth, DNA-binding protein Tax=GWB2_Bacteroidetes_41_8_curated
hypothetical protein
Displaying 14 items

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