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SCNpilot_BF_INOC_scaffold_16

Search features with annotation key words

Displaying items 1-30 of 547 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_16_1
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102..995
DNA (894bp) protein (298aa)
hypothetical protein, partial n=1 Tax=Psychromonas ossibalaenae RepID=UPI00035CFCED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD48978.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax paci
SCNpilot_BF_INOC_scaffold_16_2
unknown

Not on your lists

1327..1953
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_16_3
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

2173..4422
DNA (2250bp) protein (750aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037DF026
VCBS repeat-containing protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_16_4
GWE2_TM6_36_25, TM6, Bacteria

Not on your lists

comp(4762..6753)
DNA (1992bp) protein (664aa)
Putative uncharacterized protein id=2301675 bin=GWA2_TM6_36_9 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWA2_TM6_36_9 organism_group=TM6
Putative uncharacterized protein Tax=GWE2_TM6_36_25
SCNpilot_BF_INOC_scaffold_16_5
unknown

Not on your lists

7096..7482
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_16_6
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7552..8235)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HMM8_PSEUO
Transcriptional regulator {ECO:0000313|EMBL:KES22508.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp.
transcriptional regulator
SCNpilot_BF_INOC_scaffold_16_7
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8232..9752)
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C7F8C
Membrane protein {ECO:0000313|EMBL:KJK04812.1}; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
integral membrane sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_16_8
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9915..12626
DNA (2712bp) protein (904aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7ULW5_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC49003.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
SCNpilot_BF_INOC_scaffold_16_9
unknown

Not on your lists

13106..13693
DNA (588bp) protein (196aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_16_10
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13969..14202)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379AA05
Uncharacterized protein {ECO:0000313|EMBL:GAN45014.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
SCNpilot_BF_INOC_scaffold_16_11
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14199..14339)
DNA (141bp) protein (47aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379AA05
Uncharacterized protein {ECO:0000313|EMBL:GAN45014.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
SCNpilot_BF_INOC_scaffold_16_12
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14724..15116
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TC32_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KEZ77370.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera
hypothetical protein
SCNpilot_BF_INOC_scaffold_16_13
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15717..16760
DNA (1044bp) protein (348aa)
Histidine kinase family id=2992325 bin=GWF1_Xanthomonadales_69_6 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
signal transduction histidine kinase LytS Tax=GWF1_Xanthomonadales_69_6_curated
histidine kinase internal region
SCNpilot_BF_INOC_scaffold_16_14
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16757..17518
DNA (762bp) protein (254aa)
Two component transcriptional regulator, LytTR family id=2992326 bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas translucens genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
DNA-binding response regulator Tax=GWF1_Xanthomonadales_69_6_curated
LytTr DNA-binding region
SCNpilot_BF_INOC_scaffold_16_15
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17919..18467
DNA (549bp) protein (183aa)
Uncharacterized protein id=2992324 bin=GWF1_Xanthomonadales_69_6 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein Tax=GWF1_Xanthomonadales_69_6_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_16_16
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18976..20511
DNA (1536bp) protein (512aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM53087.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeon
Ferredoxin reductase id=2941011 bin=GWF1_Xanthomonadales_69_6 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
oxygenase
SCNpilot_BF_INOC_scaffold_16_17
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20620..22335)
DNA (1716bp) protein (572aa)
Putative uncharacterized protein n=1 Tax=Bacillus licheniformis (strain DSM 13 / ATCC 14580) RepID=Q62XX1_BACLD
Triple helix repeat-containing collagen {ECO:0000313|EMBL:AGC43913.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;
hypothetical protein
SCNpilot_BF_INOC_scaffold_16_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(22338..22655)
DNA (318bp) protein (106aa)
Uncharacterized protein {ECO:0000313|EMBL:EEF57474.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
SCNpilot_BF_INOC_scaffold_16_19
unknown

Not on your lists

22928..23260
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_16_20
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23505..24566
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=2 Tax=Xanthomonas campestris RepID=Q8P846_XANCP
Uncharacterized protein {ECO:0000313|EMBL:EYR65422.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_16_21

Not on your lists

25164..25433
DNA (270bp) protein (90aa)
Marine sediment metagenome DNA, contig: S03H2_S18136 {ECO:0000313|EMBL:GAH65137.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
SCNpilot_BF_INOC_scaffold_16_22
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25430..27076
DNA (1647bp) protein (549aa)
Triple helix repeat-containing collagen n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CBB5_MYXFH
Phage tail fiber protein {ECO:0000313|EMBL:KFE68250.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hya
triple helix repeat-containing collagen
SCNpilot_BF_INOC_scaffold_16_23
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27267..32699)
DNA (5433bp) protein (1811aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E5018
Fibronectin type III domain protein {ECO:0000313|EMBL:ADX44575.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
kelch domain-containing protein
SCNpilot_BF_INOC_scaffold_16_24
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32956..36060)
DNA (3105bp) protein (1035aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000362E7BC
Uncharacterized protein {ECO:0000313|EMBL:EFK07421.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_16_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36276..37736
DNA (1461bp) protein (487aa)
Heat shock protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVQ4_9GAMM
Heat shock protein {ECO:0000313|EMBL:EIL91295.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathi
heat shock protein Hsp70
SCNpilot_BF_INOC_scaffold_16_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37867..38583
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003819605
Uncharacterized protein {ECO:0000313|EMBL:EIL95196.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
SCNpilot_BF_INOC_scaffold_16_27
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

39174..45047
DNA (5874bp) protein (1958aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI0003803750
conserved repeat domain-containing protein
Tax=BJP_IG2157_Anaerolineales_55_23
SCNpilot_BF_INOC_scaffold_16_28
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45296..45973)
DNA (678bp) protein (226aa)
Type 12 methyltransferase n=1 Tax=Achromobacter piechaudii HLE RepID=J4PFB5_9BURK
Type 12 methyltransferase {ECO:0000313|EMBL:EJO32477.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter pi
type 12 methyltransferase
SCNpilot_BF_INOC_scaffold_16_29
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46072..46551)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZ85_RAMTT
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:KGH11827.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamon
hypothetical protein
SCNpilot_BF_INOC_scaffold_16_30
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46889..47602
DNA (714bp) protein (238aa)
Putative uncharacterized protein orf240 n=1 Tax=Xanthomonas campestris pv. vitians RepID=Q5BMX0_XANCA
Putative uncharacterized protein orf240 {ECO:0000313|EMBL:AAX24151.1}; TaxID=83224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xan
hypothetical protein
Displaying items 1-30 of 547 in total

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