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SCNpilot_BF_INOC_scaffold_44

Search features with annotation key words

Displaying items 121-150 of 520 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_44_121
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155814..157028
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382AE37
ABC transporter-like protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_BF_INOC_scaffold_44_122
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157025..157939
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000360EC6E
methyltransferase domain protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_44_123
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158139..160004
DNA (1866bp) protein (622aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036054E9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE16647.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophil
SCNpilot_BF_INOC_scaffold_44_124
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160018..160914
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036947D1
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:AIF49300.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica
SCNpilot_BF_INOC_scaffold_44_125
unknown

Not on your lists

comp(160922..161590)
DNA (669bp) protein (223aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_44_126
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161763..163424)
DNA (1662bp) protein (554aa)
ABC transporter ATP-binding protein n=1 Tax=Dyella japonica RepID=UPI0002E45678
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIF49286.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jap
SCNpilot_BF_INOC_scaffold_44_127
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

163673..164152
DNA (480bp) protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF84728.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
SCNpilot_BF_INOC_scaffold_44_128
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164234..165220)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3D2A1_9BURK
type 11 methyltransferase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
SCNpilot_BF_INOC_scaffold_44_129
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165217..167469)
DNA (2253bp) protein (751aa)
TPR repeat-containing protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QSV8_METTR
O-linked N-acetylglucosamine transferase, SPINDLY family Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
TPR repeat-containing protein
SCNpilot_BF_INOC_scaffold_44_130
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167503..168756
DNA (1254bp) protein (418aa)
Serine hydroxymethyltransferase id=2615361 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
glycine/serine hydroxymethyltransferase
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_44_131
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168868..169389
DNA (522bp) protein (174aa)
Transcriptional regulator NrdR n=1 Tax=mine drainage metagenome RepID=T1CCE8_9ZZZZ
NrdR family transcriptional regulator
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae
SCNpilot_BF_INOC_scaffold_44_132
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169410..170591
DNA (1182bp) protein (394aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTP7_9GAMM
riboflavin biosynthesis protein RibD
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella
SCNpilot_BF_INOC_scaffold_44_133
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170667..171266
DNA (600bp) protein (200aa)
Riboflavin synthase subunit alpha n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ99_9GAMM
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:EIL99540.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhoda
riboflavin synthase subunit alpha
SCNpilot_BF_INOC_scaffold_44_134
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171329..172423
DNA (1095bp) protein (365aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00180}; Short=DHBP synthase {ECO:0000256|HAMAP-Rule:MF_00180};; EC=4.1.99.12 {ECO:0000256|HAMAP-Rule:MF_00180};; TaxID=1475481
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.2.- 3.5.4.25)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Dyella ginsengisoli RepID=UPI00034D7A86
SCNpilot_BF_INOC_scaffold_44_135
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172643..173107
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037D21C5
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
6,7-dimethyl-8-ribityllumazine synthase
SCNpilot_BF_INOC_scaffold_44_136
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173104..173559
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CEBAF
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1475481 species="Bacteria; Prot
transcription antitermination factor NusB
SCNpilot_BF_INOC_scaffold_44_137
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173566..174540
DNA (975bp) protein (325aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
Thiamine-monophosphate kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZA7_9GAMM
thiamine-phosphate kinase
SCNpilot_BF_INOC_scaffold_44_138
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174537..175028
DNA (492bp) protein (164aa)
Phosphatidylglycerophosphatase A id=2892365 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodanobacter spathiphylli genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
phosphatidylglycerophosphatase A
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_44_139
unknown

Not on your lists

comp(175025..175801)
DNA (777bp) protein (259aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_44_140
unknown

Not on your lists

comp(175896..176447)
DNA (552bp) protein (184aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_44_141
unknown

Not on your lists

comp(176444..176989)
DNA (546bp) protein (182aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_44_142
unknown

Not on your lists

comp(176986..177423)
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_44_143
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177433..178809)
DNA (1377bp) protein (459aa)
dimethylmenaquinone methyltransferase n=1 Tax=Dyella japonica RepID=UPI000305B81C
dimethylmenaquinone methyltransferase
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:AHX14657.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella j
SCNpilot_BF_INOC_scaffold_44_144
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178813..179397)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036CD2D3
Putative phospholipid-binding domain protein {ECO:0000313|EMBL:EGV49893.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of
transport-associated
SCNpilot_BF_INOC_scaffold_44_145
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179408..179758)
DNA (351bp) protein (117aa)
UPF0102 protein UUA_01814 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WT05_9GAMM
UPF0102 protein LF63_0112505 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiag
TIGR00252 family protein
SCNpilot_BF_INOC_scaffold_44_146
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179758..181533)
DNA (1776bp) protein (592aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C25BC
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AGG90347.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="
SCNpilot_BF_INOC_scaffold_44_147
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

181616..182452
DNA (837bp) protein (279aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Rhodanobacter denitrificans RepID=M4NS29_9GAMM
putative S-adenosylmethionine-dependent methyltransferase, YraL family
SCNpilot_BF_INOC_scaffold_44_148
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183500..184192)
DNA (693bp) protein (231aa)
Probable glutathione S-transferase n=2 Tax=Bordetella bronchiseptica RepID=K0MJC6_BORBM
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:KDD58709.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchis
SCNpilot_BF_INOC_scaffold_44_149
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184440..184715
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WWM6_PSEUU
hypothetical protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_44_150
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184770..185879
DNA (1110bp) protein (370aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthom
S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.284)
S-(Hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SWL3_XANCT
Displaying items 121-150 of 520 in total

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