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SCNpilot_BF_INOC_scaffold_44

Search features with annotation key words

Displaying items 1-30 of 520 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_44_1
Bhargavaea cecembensis, Bhargavaea, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(47..1063)
DNA (1017bp) protein (339aa)
Cell wall-associated polypeptide n=1 Tax=Bhargavaea cecembensis DSE10 RepID=M7NE31_9BACL
Cell wall-associated polypeptide {ECO:0000313|EMBL:EMR05527.1}; TaxID=1235279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Bhargavaea.;" source="Bhargavaea cecembensis DSE10.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_44_2
unknown

Not on your lists

3389..3667
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_44_3
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3719..6502)
DNA (2784bp) protein (928aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valine--tRNA ligase; Valyl-tRNA synt
valyl-tRNA synthetase id=2591254 bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas translucens genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
valS; valyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_44_4
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6665..7717
DNA (1053bp) protein (351aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL35977.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
Cyclic nucleotide-binding domain protein id=2940949 bin=GWF1_Xanthomonadales_69_6 species=gamma proteobacterium HTCC5015 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
cyclic nucleotide-binding protein
SCNpilot_BF_INOC_scaffold_44_5
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7902..9353)
DNA (1452bp) protein (484aa)
Transcriptional regulator, GntR family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SM39_NOCSJ
Uncharacterized protein {ECO:0000313|EMBL:KFL35600.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
GntR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_44_6
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9414..10091
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6W6S7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KFL35599.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
hypothetical protein
SCNpilot_BF_INOC_scaffold_44_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10147..11127)
DNA (981bp) protein (327aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
proline iminopeptidase (EC:3.4.11.5)
proline iminopeptidase n=1 Tax=Variovorax paradoxus RepID=UPI00035C8227
SCNpilot_BF_INOC_scaffold_44_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11312..11956)
DNA (645bp) protein (215aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {E
ribose-5-phosphate isomerase (EC:5.3.1.6)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E3C90
SCNpilot_BF_INOC_scaffold_44_9
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12009..12461)
DNA (453bp) protein (151aa)
EVE domain-containing protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034574A1
EVE domain-containing protein {ECO:0000313|EMBL:EYR67780.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter c
hypothetical protein
SCNpilot_BF_INOC_scaffold_44_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12625..13227)
DNA (603bp) protein (201aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadale
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WW00_9GAMM
5,10-methenyltetrahydrofolate synthetase
SCNpilot_BF_INOC_scaffold_44_11
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13805..14107)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003711012
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugaki
hypothetical protein
SCNpilot_BF_INOC_scaffold_44_12
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14277..14501)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036DA016
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_44_13
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14565..19136)
DNA (4572bp) protein (1524aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella sp. (strain MR-7) RepID=Q0HZZ0_SHESR
Diguanylate cyclase {ECO:0000313|EMBL:GAN45398.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter s
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
SCNpilot_BF_INOC_scaffold_44_14
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19283..19852
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000360D115
Uncharacterized protein {ECO:0000313|EMBL:GAN45397.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
SCNpilot_BF_INOC_scaffold_44_15
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19866..21176
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003749A10
Proline aminopeptidase P II {ECO:0000313|EMBL:GAN45396.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakii
Xaa-Pro aminopeptidase
SCNpilot_BF_INOC_scaffold_44_16

Not on your lists

21330..22688
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003619EC7
Virulence factor family protein {ECO:0000313|EMBL:EQD64415.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
AcvB-like protein
SCNpilot_BF_INOC_scaffold_44_17
unknown

Not on your lists

22714..23409
DNA (696bp) protein (232aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_44_18
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23419..26037)
DNA (2619bp) protein (873aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035DAC7C
Lysyl transferase {ECO:0000313|EMBL:GAN45394.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sed
mprF; putative lysylphosphatidylglycerol synthetase
SCNpilot_BF_INOC_scaffold_44_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26160..28496)
DNA (2337bp) protein (779aa)
serine/threonine protein kinase n=1 Tax=Salisaeta longa RepID=UPI0003B639AE
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG88165.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SCNpilot_BF_INOC_scaffold_44_20
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28493..29059)
DNA (567bp) protein (189aa)
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QMR3_9CYAN
RNA polymerase sigma 70 {ECO:0000313|EMBL:EYR68784.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
ECF subfamily RNA polymerase sigma-24 factor
SCNpilot_BF_INOC_scaffold_44_21
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29230..30102)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00036E8955
Uncharacterized protein {ECO:0000313|EMBL:AHY58598.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomo
hypothetical protein
SCNpilot_BF_INOC_scaffold_44_22
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30119..31447)
DNA (1329bp) protein (443aa)
Xaa-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582}; Short=X-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279};; EC=3.4.13.9 {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382485C
proline dipeptidase
SCNpilot_BF_INOC_scaffold_44_23
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31657..32997
DNA (1341bp) protein (447aa)
MFS transporter n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000345512C
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_44_24
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32994..34139
DNA (1146bp) protein (382aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WT47_PSEUU
Epimerase {ECO:0000313|EMBL:AKC88029.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonens
NAD-dependent epimerase/dehydratase
SCNpilot_BF_INOC_scaffold_44_25
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34437..35396)
DNA (960bp) protein (320aa)
Putative threonine dehydratase catabolic {ECO:0000313|EMBL:CCH21522.1}; EC=4.3.1.19 {ECO:0000313|EMBL:CCH21522.1};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporace
Putative threonine dehydratase catabolic n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LCH5_9ACTO
pyridoxal-phosphate dependent enzyme family protein
SCNpilot_BF_INOC_scaffold_44_26
Pantoea anthophila, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35879..36307)
DNA (429bp) protein (143aa)
LysM domain/BON superfamily protein n=1 Tax=Pantoea sp. Sc1 RepID=H8DIH9_9ENTR
LysM domain/BON superfamily protein
Peptidoglycan-binding protein {ECO:0000313|EMBL:KKB04333.1}; TaxID=470931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea anth
SCNpilot_BF_INOC_scaffold_44_27
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36510..37229)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C8EE7
Putative uncharacterized protein {ECO:0000313|EMBL:EHN64342.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas tes
calcium-binding protein
SCNpilot_BF_INOC_scaffold_44_28
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37391..37735
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00037C7DFB
Diguanylate cyclase {ECO:0000313|EMBL:EQM79323.1}; TaxID=1333856 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri
response regulator receiver modulated diguanylate cyclase
SCNpilot_BF_INOC_scaffold_44_29
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37823..38743
DNA (921bp) protein (307aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugaki
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036BB2A2
arginase
SCNpilot_BF_INOC_scaffold_44_30
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38811..39620)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E2F92
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFB72440.1}; Flags: Precursor;; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulib
Displaying items 1-30 of 520 in total

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