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SCNpilot_BF_INOC_scaffold_568

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_568_1
unknown

Not on your lists

comp(1..273)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_568_2
unknown

Not on your lists

comp(361..666)
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_568_3
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

801..1826
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAJ5_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED40079.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Sten
hypothetical protein
SCNpilot_BF_INOC_scaffold_568_4
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2241..2822)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9FNC3_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EKV02666.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_568_5
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2942..3793)
DNA (852bp) protein (284aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036D95E9
ribosomal RNA small subunit methyltransferase A
SCNpilot_BF_INOC_scaffold_568_6
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3790..4719)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003743C9D
XRE family transcriptional regulator {ECO:0000313|EMBL:ESJ25032.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupri
XRE family transcriptional regulator
SCNpilot_BF_INOC_scaffold_568_7
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4847..5767
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000361A977
Uncharacterized protein {ECO:0000313|EMBL:EGY25530.1}; TaxID=298701 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
hypothetical protein
SCNpilot_BF_INOC_scaffold_568_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5873..6853)
DNA (981bp) protein (327aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WVN0_9GAMM
SCNpilot_BF_INOC_scaffold_568_9
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6879..8249)
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E4FA9
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01
molecular chaperone SurA
SCNpilot_BF_INOC_scaffold_568_10
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8366..10666)
DNA (2301bp) protein (767aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000363AEA2
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xa
organic solvent tolerance protein
SCNpilot_BF_INOC_scaffold_568_11
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10844..11239
DNA (396bp) protein (132aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D8BFA
methionine sulfoxide reductase B
SCNpilot_BF_INOC_scaffold_568_12
unknown

Not on your lists

comp(11246..11956)
DNA (711bp) protein (237aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_568_13
unknown

Not on your lists

12125..12535
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_568_14

Not on your lists

comp(12588..13511)
DNA (924bp) protein (308aa)
Histone deacetylase superfamily protein n=2 Tax=mine drainage metagenome RepID=T0ZEK9_9ZZZZ
Histone deacetylase superfamily protein {ECO:0000313|EMBL:EQD43518.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
acetoin utilization protein
SCNpilot_BF_INOC_scaffold_568_15
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13544..14110)
DNA (567bp) protein (189aa)
ATP--cobalamin adenosyltransferase n=1 Tax=Dyella japonica RepID=UPI000303698E
ATP--cobalamin adenosyltransferase
ATP--cobalamin adenosyltransferase {ECO:0000313|EMBL:AIF46923.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japo
SCNpilot_BF_INOC_scaffold_568_16
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14337..16190
DNA (1854bp) protein (618aa)
Peptidase M48 Ste24p n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q7J8_ACIAP
peptidase M48 Ste24p
Peptidase M48 Ste24p {ECO:0000313|EMBL:ADX47071.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain
SCNpilot_BF_INOC_scaffold_568_17

Not on your lists

comp(16233..16838)
DNA (606bp) protein (202aa)
Phosphoglycerate mutase family protein n=3 Tax=mine drainage metagenome RepID=T1AN76_9ZZZZ
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EQD43515.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_568_18
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(16829..17584)
DNA (756bp) protein (252aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin sy
Cobalamin synthase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DLA8_9BURK
cobalamin 5'-phosphate synthase
SCNpilot_BF_INOC_scaffold_568_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17710..18930
DNA (1221bp) protein (407aa)
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC:1.14.13.-)
2-octaprenyl-6-methoxyphenol hydroxylase {ECO:0000313|EMBL:AGG90317.1}; EC=1.14.13.- {ECO:0000313|EMBL:AGG90317.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacte
2-octaprenyl-6-methoxyphenol hydroxylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJN8_9GAMM
SCNpilot_BF_INOC_scaffold_568_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18927..20105
DNA (1179bp) protein (393aa)
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WEV2_9GAMM
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family {ECO:0000313|EMBL:AGG90316.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
SCNpilot_BF_INOC_scaffold_568_21
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

20290..22575
DNA (2286bp) protein (762aa)
Glycosyl hydrolase Tax=CG_Ignavi_01
IPT/TIG domain protein id=4086002 bin=GWF2_Bacteroidetes_38_335 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
glycosyl hydrolase
SCNpilot_BF_INOC_scaffold_568_22
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22644..23087)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035F883C
Uncharacterized protein {ECO:0000313|EMBL:GAO38906.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
SCNpilot_BF_INOC_scaffold_568_23
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23221..24441)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI00035CA5EA
Uncharacterized protein {ECO:0000313|EMBL:ELP61879.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
SCNpilot_BF_INOC_scaffold_568_24
Geminocystis sp. NIES-3709, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

24638..27217
DNA (2580bp) protein (860aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00037C0C48
Alkaline phosphatase {ECO:0000313|EMBL:BAQ65373.1}; TaxID=1617448 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3709.;"
putative extracellular nuclease
SCNpilot_BF_INOC_scaffold_568_25
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27268..28998)
DNA (1731bp) protein (577aa)
Signal transduction histidine kinase n=1 Tax=Acidovorax sp. CF316 RepID=J1EFM3_9BURK
Atypical hybrid histidine kinase {ECO:0000313|EMBL:KGQ18196.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacte
response regulator receiver sensor hybrid histidine kinase
SCNpilot_BF_INOC_scaffold_568_26
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29008..33831)
DNA (4824bp) protein (1608aa)
GAF sensor hybrid histidine kinase (EC:2.7.13.3)
GAF sensor hybrid histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ64_9BACT
two-component hybrid sensor and regulator Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCNpilot_BF_INOC_scaffold_568_27
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33991..35103)
DNA (1113bp) protein (371aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPW2_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:EYR66969.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
SCNpilot_BF_INOC_scaffold_568_28
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35225..35737)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3GAR0_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EYR68652.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
SCNpilot_BF_INOC_scaffold_568_29
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35933..37219)
DNA (1287bp) protein (429aa)
Putative uncharacterized protein n=1 Tax=Janthinobacterium lividum RepID=A0SZ27_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EYR70120.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
SCNpilot_BF_INOC_scaffold_568_30
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37497..38807)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036F4C32
acetamidase/formamidase
Acetamidase/Formamidase {ECO:0000313|EMBL:AFE04258.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
Displaying items 1-30 of 57 in total

View Taxonomy