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SCNpilot_BF_INOC_scaffold_6

Search features with annotation key words

Displaying items 331-360 of 360 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_6_331
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(382540..382797)
DNA (258bp) protein (86aa)
acyl-CoA-binding protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036EED3F
acyl-CoA-binding protein Tax=GWF1_Xanthomonadales_69_6_curated
acyl-CoA-binding protein
SCNpilot_BF_INOC_scaffold_6_332
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

383106..385094
DNA (1989bp) protein (663aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037E30A2
short-chain dehydrogenase
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_6_333

Not on your lists

385341..386153
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036A95CB
Dihydrodipicolinate reductase {ECO:0000313|EMBL:EQD45153.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
dihydrodipicolinate reductase
SCNpilot_BF_INOC_scaffold_6_334
unknown

Not on your lists

comp(386354..386677)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_6_335
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

386927..388066
DNA (1140bp) protein (380aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carbamoyl phosphate synthase small subunit n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C78E4
carbamoyl-phosphate synthase small subunit
SCNpilot_BF_INOC_scaffold_6_336
unknown

Not on your lists

388075..388413
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_6_337
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

388397..391624
DNA (3228bp) protein (1076aa)
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria;
carbamoyl phosphate synthase large subunit n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D0580
SCNpilot_BF_INOC_scaffold_6_338
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

391621..392097
DNA (477bp) protein (159aa)
transcription elongation factor GreA n=1 Tax=Rudaea cellulosilytica RepID=UPI0003603984
greA; transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1379159 species="Bacteri
SCNpilot_BF_INOC_scaffold_6_339
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

392134..393078
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036048FF
Uncharacterized protein {ECO:0000313|EMBL:KFN49999.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
rpfE; regulatory protein RpfE
SCNpilot_BF_INOC_scaffold_6_340
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

393082..394818
DNA (1737bp) protein (579aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036A53B8
ssDNA exonuclease RecJ
SsDNA exonuclease RecJ {ECO:0000313|EMBL:AHX12968.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;
SCNpilot_BF_INOC_scaffold_6_341
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

394930..396021
DNA (1092bp) protein (364aa)
Peptide chain release factor 2 n=1 Tax=Rhodanobacter denitrificans RepID=M4NDJ7_9GAMM
bacterial peptide chain release factor 2 (bRF-2)
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; Flags: Precursor;; TaxID=666685 species="Bacteria; Prote
SCNpilot_BF_INOC_scaffold_6_342
Ectocarpus siliculosus, Ectocarpus, Ectocarpales, Phaeophyceae, Eukaryota

Not on your lists

396049..397128
DNA (1080bp) protein (360aa)
Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus RepID=D7FQ25_ECTSI
Similar to ankyrin 2,3/unc44 {ECO:0000313|EMBL:CBJ48357.1}; TaxID=2880 species="Eukaryota; Stramenopiles; PX clade; Phaeophyceae; Ectocarpales; Ectocarpaceae; Ectocarpus.;" source="Ectocarpus siliculo
hypothetical protein
SCNpilot_BF_INOC_scaffold_6_343
Pseudogymnoascus pannorum, Pseudogymnoascus, Leotiomycetes, Ascomycota, Fungi

Not on your lists

397176..397802
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4J561_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFY32155.1}; TaxID=1420906 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Leotiomycetes incertae sedis; Pseudeurotiaceae; Pseu
SCNpilot_BF_INOC_scaffold_6_344
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

397852..399408
DNA (1557bp) protein (519aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSQ3_9GAMM
lysyl-tRNA synthetase (class II)
SCNpilot_BF_INOC_scaffold_6_345
unknown

Not on your lists

399414..400559
DNA (1146bp) protein (382aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_6_346
unknown

Not on your lists

400556..401485
DNA (930bp) protein (310aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_6_347
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

401658..401957
DNA (300bp) protein (100aa)
YciI enzymatic domain-containing protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00037BBBDD
BolA family transcriptional regulator
BolA family transcriptional regulator {ECO:0000313|EMBL:AJC47773.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanth
SCNpilot_BF_INOC_scaffold_6_348
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

401954..402220
DNA (267bp) protein (89aa)
BolA protein n=2 Tax=Xanthomonas RepID=V7ZBR7_9XANT
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_BF_INOC_scaffold_6_349
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

402233..403066
DNA (834bp) protein (278aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methyloco
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000374E688
PpiC-type peptidyl-prolyl cis-trans isomerase
SCNpilot_BF_INOC_scaffold_6_350
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

403191..403880
DNA (690bp) protein (230aa)
Predicted protein n=1 Tax=Streptomyces sp. C RepID=D9VN66_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL13572.1}; TaxID=253839 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_6_351
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(404124..404807)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003128FE4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF47912.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_BF_INOC_scaffold_6_352
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(404970..406496)
DNA (1527bp) protein (509aa)
Exodeoxyribonuclease I {ECO:0000256|PIRNR:PIRNR000977}; EC=3.1.11.1 {ECO:0000256|PIRNR:PIRNR000977};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
exonuclease I (EC:3.1.11.1)
Exonuclease I n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNN0_9GAMM
SCNpilot_BF_INOC_scaffold_6_353
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

407360..408277
DNA (918bp) protein (306aa)
ABC transporter related protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U6X6_OCEP5
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADR35979.1}; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus
SCNpilot_BF_INOC_scaffold_6_354
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

408270..409052
DNA (783bp) protein (261aa)
ABC-type polysaccharide/polyol phosphate export system, permease component n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EJA4_9CYAN
ABC-type polysaccharide/polyol phosphate export system, permease component {ECO:0000313|EMBL:EKU97309.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptoly
ABC transporter
SCNpilot_BF_INOC_scaffold_6_355
Cyanothece sp. ATCC 51142, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

409064..409360
DNA (297bp) protein (99aa)
Uncharacterized protein n=2 Tax=Cyanothece RepID=B1WWS5_CYAA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB52394.1}; TaxID=43989 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain ATCC 51142).;"
SCNpilot_BF_INOC_scaffold_6_356

Not on your lists

409380..409718
DNA (339bp) protein (113aa)
MbtH-like protein n=1 Tax=uncultured bacterium esnapd14 RepID=S5UCP7_9BACT
MbtH-like protein {ECO:0000313|EMBL:AGS49692.1}; TaxID=1366594 species="Bacteria; environmental samples.;" source="uncultured bacterium esnapd14.;"
MbtH domain-containing protein
SCNpilot_BF_INOC_scaffold_6_357
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

409748..409960
DNA (213bp) protein (71aa)
antibiotic synthesis protein MbtH n=1 Tax=Fischerella muscicola RepID=UPI0002E9C2D9
hypothetical protein
Antibiotic synthesis protein MbtH {ECO:0000313|EMBL:KIJ75058.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB51128
SCNpilot_BF_INOC_scaffold_6_358
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

410095..410883
DNA (789bp) protein (263aa)
oleoyl-ACP hydrolase (EC:3.1.2.14)
Oleoyl-(Acyl-carrier-protein) hydrolase {ECO:0000313|EMBL:ACV63461.1}; EC=3.1.2.14 {ECO:0000313|EMBL:ACV63461.1};; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae
Oleoyl-(Acyl-carrier-protein) hydrolase n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W165_DESAS
SCNpilot_BF_INOC_scaffold_6_359
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

410964..418973
DNA (8010bp) protein (2670aa)
Putative non ribosomal peptide synthetase protein n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NH70_RALSL
Putative non ribosomal peptide synthetase protein {ECO:0000313|EMBL:CBJ40244.1}; TaxID=859655 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" sou
putative non ribosomal peptide synthetase protein
SCNpilot_BF_INOC_scaffold_6_360
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

418973..423610
DNA (4638bp) protein (1546aa)
Amino acid adenylation domain protein {ECO:0000313|EMBL:EGK84886.1}; EC=5.1.1.3 {ECO:0000313|EMBL:EGK84886.1};; EC=6.2.1.20 {ECO:0000313|EMBL:EGK84886.1};; TaxID=756067 species="Bacteria; Cyanobacteri
amino acid adenylation protein (EC:5.1.1.3 6.2.1.20)
Amino acid adenylation domain protein n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UM67_9CYAN
Displaying items 331-360 of 360 in total

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