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SCNpilot_BF_INOC_scaffold_6

Search features with annotation key words

Displaying items 241-270 of 360 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_6_241

Not on your lists

comp(280159..280656)
DNA (498bp) protein (166aa)
SmpB protein n=2 Tax=mine drainage metagenome RepID=T0YBT7_9ZZZZ
SmpB protein {ECO:0000313|EMBL:EQD30573.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
smpB; SsrA-binding protein
SCNpilot_BF_INOC_scaffold_6_242
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

280723..281268
DNA (546bp) protein (182aa)
Oligoketide cyclase/lipid transport protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6T9_9GAMM
Oligoketide cyclase/lipid transport protein {ECO:0000313|EMBL:EIL95180.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sou
oligoketide cyclase
SCNpilot_BF_INOC_scaffold_6_243
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

281261..281566
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI000372B845
UPF0125 protein QR66_01520 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobac
hypothetical protein
SCNpilot_BF_INOC_scaffold_6_244
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(281563..281976)
DNA (414bp) protein (138aa)
Small protein A (TmRNA-binding) n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNN8_9GAMM
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea
small protein A (tmRNA-binding)
SCNpilot_BF_INOC_scaffold_6_245
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

282305..282712
DNA (408bp) protein (136aa)
Fur family transcriptional regulator n=1 Tax=Rudaea cellulosilytica RepID=UPI0003604ECC
Fur family transcriptional regulator {ECO:0000313|EMBL:KJV33797.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Lutei
Fur family transcriptional regulator
SCNpilot_BF_INOC_scaffold_6_246
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

282737..283120
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=3 Tax=Xanthomonas campestris pv. campestris RepID=Q4URK0_XANC8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM40266.1}; TaxID=190485 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campes
SCNpilot_BF_INOC_scaffold_6_247
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

283405..284403
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SP23_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ERK90612.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
RNA ligase, DRB0094 family protein
SCNpilot_BF_INOC_scaffold_6_248
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(284489..285232)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F0171
Uncharacterized protein {ECO:0000313|EMBL:ESQ15898.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source
methylase involved in ubiquinone/menaquinone biosynthesis
SCNpilot_BF_INOC_scaffold_6_249
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(285219..286412)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D8BDE
S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase rbh
S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase {ECO:0000313|EMBL:AHF04557.1}; TaxID=765910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae;
SCNpilot_BF_INOC_scaffold_6_250
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

286525..287775
DNA (1251bp) protein (417aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
regS; two-component system sensor histidine kinase (EC:2.7.13.3)
Two-component system sensor histidine kinase n=4 Tax=Xanthomonas campestris RepID=B0RTT0_XANCB
SCNpilot_BF_INOC_scaffold_6_251
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

287772..288305
DNA (534bp) protein (178aa)
Uncharacterized protein n=5 Tax=Stenotrophomonas maltophilia RepID=J7SWP5_STEMA
Dna binding response regulator PrrA (RegA)
Two component transcriptional regulator, Fis family {ECO:0000313|EMBL:ACF51227.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomo
SCNpilot_BF_INOC_scaffold_6_252
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

288594..290636
DNA (2043bp) protein (681aa)
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00037E371C
Uncharacterized protein {ECO:0000313|EMBL:EYR67158.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
TonB-dependent receptor
SCNpilot_BF_INOC_scaffold_6_253
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

290713..291087
DNA (375bp) protein (125aa)
glyoxalase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B4C764
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
glyoxalase
SCNpilot_BF_INOC_scaffold_6_254
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

291128..291688
DNA (561bp) protein (187aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSA5_OPITP
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACB75704.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (
SCNpilot_BF_INOC_scaffold_6_255
Schlesneria paludicola, Schlesneria, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

291832..292470
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AC6B1
SCNpilot_BF_INOC_scaffold_6_256
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(292560..294842)
DNA (2283bp) protein (761aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B5287C
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG92487.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SCNpilot_BF_INOC_scaffold_6_257
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(294894..295298)
DNA (405bp) protein (135aa)
PF04237 family protein n=2 Tax=Leptospira alstoni RepID=M6CWM0_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EYR67018.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
SCNpilot_BF_INOC_scaffold_6_258
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(295479..296549)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Pseudomonas geniculata RepID=UPI00029A4203
Uncharacterized protein {ECO:0000313|EMBL:EYR68974.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
SCNpilot_BF_INOC_scaffold_6_259
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

296701..297636
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003720D73
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KGB52197.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source=
glycine cleavage system transcriptional activator
SCNpilot_BF_INOC_scaffold_6_260
bacterium YEK0313, Bacteria

Not on your lists

comp(297645..298418)
DNA (774bp) protein (258aa)
short-chain dehydrogenase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F227
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:CEJ13428.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
short-chain dehydrogenase
SCNpilot_BF_INOC_scaffold_6_261
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

298657..299592
DNA (936bp) protein (312aa)
AraC family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2W3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EYR65689.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
SCNpilot_BF_INOC_scaffold_6_262
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

299880..300683
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKQ0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87791.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
SCNpilot_BF_INOC_scaffold_6_263
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

300968..301315
DNA (348bp) protein (116aa)
tRNA-binding protein n=1 Tax=Dyella japonica RepID=UPI0002FD56D9
tRNA-binding protein
tRNA-binding protein {ECO:0000313|EMBL:EIL95537.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp.
SCNpilot_BF_INOC_scaffold_6_264
Xanthomonas sp. Nyagatare, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(301373..302569)
DNA (1197bp) protein (399aa)
fadA; acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KGK58048.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KGK58048.1};; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomona
acetyl-CoA acetyltransferase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DF2548
SCNpilot_BF_INOC_scaffold_6_265
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(302587..304956)
DNA (2370bp) protein (790aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Dyella japonica RepID=UPI0002F248C9
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AHX13076.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangni
3-hydroxyacyl-CoA dehydrogenase
SCNpilot_BF_INOC_scaffold_6_266
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(305094..305714)
DNA (621bp) protein (207aa)
Transcriptional regulator, TetR family protein n=3 Tax=mine drainage metagenome RepID=T1CM34_9ZZZZ
TetR family transcriptional regulator {ECO:0000313|EMBL:KGI78446.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="O
TetR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_6_267
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

306072..306497
DNA (426bp) protein (142aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase id=2715433 bin=GWF1_Xanthomonadales_69_6 species=Laribacter hongkongensis genus=Laribacter taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_BF_INOC_scaffold_6_268
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

306508..307617
DNA (1110bp) protein (370aa)
50S rRNA methyltransferase n=1 Tax=Rudaea cellulosilytica RepID=UPI000375D192
50S rRNA methyltransferase
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_6_269
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

307607..308365
DNA (759bp) protein (253aa)
Type IV pilus biogenesis/stability protein PilW n=1 Tax=Rhodanobacter denitrificans RepID=I4WXN2_9GAMM
type IV pilus biogenesis/stability protein PilW
type IV pilus biogenesis/stability protein PilW Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_BF_INOC_scaffold_6_270
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

308362..309516
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BDA8D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF48012.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
Displaying items 241-270 of 360 in total

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