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SCNpilot_BF_INOC_scaffold_6

Search features with annotation key words

Displaying items 181-210 of 360 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_6_181
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

197596..201384
DNA (3789bp) protein (1263aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MMM4_PSEPS
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ELS28761.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas o
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
SCNpilot_BF_INOC_scaffold_6_182
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201420..201974)
DNA (555bp) protein (185aa)
Response regulator receiver n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AD26_9PROT
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:BAN36103.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella
SCNpilot_BF_INOC_scaffold_6_183
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201998..203125)
DNA (1128bp) protein (376aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
histidine kinase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000361F38D
histidine kinase
SCNpilot_BF_INOC_scaffold_6_184
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

203611..206481
DNA (2871bp) protein (957aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine d
glycine dehydrogenase (EC:1.4.4.2)
Glycine dehydrogenase (decarboxylating) n=1 Tax=Rhodanobacter denitrificans RepID=I4WY26_9GAMM
SCNpilot_BF_INOC_scaffold_6_185
unknown

Not on your lists

comp(206639..208099)
DNA (1461bp) protein (487aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_6_186
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(208220..208858)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI000368DE96
Uncharacterized protein {ECO:0000313|EMBL:EYR65997.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
SCNpilot_BF_INOC_scaffold_6_187
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(208879..210396)
DNA (1518bp) protein (506aa)
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GYP9_METFK
RND transporter
RND transporter {ECO:0000313|EMBL:AJP49546.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCNpilot_BF_INOC_scaffold_6_188
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(210383..211561)
DNA (1179bp) protein (393aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DPH3_METS0
RND transporter MFP subunit
RND transporter MFP subunit {ECO:0000313|EMBL:AJP48495.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca
SCNpilot_BF_INOC_scaffold_6_189
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(211551..214757)
DNA (3207bp) protein (1069aa)
Probable cation efflux protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GBY6_9BRAD
RND transporter {ECO:0000313|EMBL:KJV35472.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
RND transporter
SCNpilot_BF_INOC_scaffold_6_190
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(215164..218472)
DNA (3309bp) protein (1103aa)
peptidase S8/S53 subtilisin kexin sedolisin Tax=RBG_13_OP8X_37_8_curated
Peptidase S8 and S53 subtilisin kexin sedolisin id=3322731 bin=GWC2_Nitrospirae_57_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
peptidase S8/S53 subtilisin kexin sedolisin
SCNpilot_BF_INOC_scaffold_6_191
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(219364..220770)
DNA (1407bp) protein (469aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00035C5907
histidine kinase
SCNpilot_BF_INOC_scaffold_6_192
Pseudomonas sp. SHC52, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(220757..221434)
DNA (678bp) protein (226aa)
DNA-binding response regulator n=1 Tax=Pseudomonas fluorescens F113 RepID=G8QBD0_PSEFL
DNA-binding response regulator {ECO:0000313|EMBL:CDF94393.1}; TaxID=984195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
DNA-binding response regulator
SCNpilot_BF_INOC_scaffold_6_193
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(221625..222641)
DNA (1017bp) protein (339aa)
2-keto-3-deoxygluconate kinase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B5BEEF
2-dehydro-3-deoxygluconokinase {ECO:0000313|EMBL:ELQ15942.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomona
2-keto-3-deoxygluconate kinase
SCNpilot_BF_INOC_scaffold_6_194
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

223024..225864
DNA (2841bp) protein (947aa)
TonB-denpendent receptor n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037AD9B2
TonB-denpendent receptor {ECO:0000313|EMBL:EYR70259.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsic
TonB-dependent receptor
SCNpilot_BF_INOC_scaffold_6_195
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

225937..227037
DNA (1101bp) protein (367aa)
pectinesterase (EC:3.1.1.11); K01051 pectinesterase [EC:3.1.1.11] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
pectinesterase (EC:3.1.1.11)
Pectinesterase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VHM7_CAUST
SCNpilot_BF_INOC_scaffold_6_196
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227844..229244)
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI0003795409
Pectate lyase {ECO:0000313|EMBL:EYR70256.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
pectate lyase
SCNpilot_BF_INOC_scaffold_6_197
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

229410..230234
DNA (825bp) protein (275aa)
2-keto-4-pentenoate hydratase n=1 Tax=Xanthomonas sacchari RepID=UPI000262B521
mhpD; 2-keto-4-pentenoate hydratase Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
2-keto-4-pentenoate hydratase
SCNpilot_BF_INOC_scaffold_6_198
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

230231..231223
DNA (993bp) protein (331aa)
C4-dicarboxylate ABC transporter n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00036C4505
C4-dicarboxylate transport system Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
C4-dicarboxylate ABC transporter
SCNpilot_BF_INOC_scaffold_6_199
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

231314..231808
DNA (495bp) protein (165aa)
C4-dicarboxylate membrane transport protein n=1 Tax=Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535 RepID=D4TB94_9XANT
dctQ; C4-dicarboxylate membrane transport protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
dctQ; putative TRAP-type C4-dicarboxylate transport system, small permease component
SCNpilot_BF_INOC_scaffold_6_200
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

231808..233088
DNA (1281bp) protein (427aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WNY5_PSEUU
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:EYR70252.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="
TRAP dicarboxylate transporter subunit DctM
SCNpilot_BF_INOC_scaffold_6_201
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

233234..234292
DNA (1059bp) protein (353aa)
LacI family transcriptional regulator n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HCY3_XANCT
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
LacI family transcriptional regulator
SCNpilot_BF_INOC_scaffold_6_202
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(234324..235424)
DNA (1101bp) protein (367aa)
Tfp pilus assembly protein, ATPase PilU id=2643316 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Twitching motility protein PilT Tax=GWF1_Xanthomonadales_69_6_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_6_203
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(235429..237012)
DNA (1584bp) protein (528aa)
Type II secretory pathway protein id=2686267 bin=GWF1_Xanthomonadales_69_6 species=gamma proteobacterium HdN1 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:KFN48458.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
type II secretory pathway protein
SCNpilot_BF_INOC_scaffold_6_204
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

237222..238262
DNA (1041bp) protein (347aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLC0_9GAMM
SCNpilot_BF_INOC_scaffold_6_205
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

238270..239028
DNA (759bp) protein (253aa)
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLB9_9GAMM
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:EIL88010.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
kduD; 2-deoxy-D-gluconate 3-dehydrogenase
SCNpilot_BF_INOC_scaffold_6_206
unknown

Not on your lists

239651..240826
DNA (1176bp) protein (392aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_6_207
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241027..241878)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00037E4E49
xanthine dehydrogenase accessory protein XdhC
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_BF_INOC_scaffold_6_208
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241989..244322)
DNA (2334bp) protein (778aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00036F63CD
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_BF_INOC_scaffold_6_209
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(244319..245707)
DNA (1389bp) protein (463aa)
Xanthine dehydrogenase, small subunit n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GFE9_9CYAN
xanthine dehydrogenase small subunit
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_6_210
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

245828..246874
DNA (1047bp) protein (349aa)
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
adenosine deaminase (EC:3.5.4.2)
adenosine deaminase n=1 Tax=Curvibacter lanceolatus RepID=UPI000364E38E
Displaying items 181-210 of 360 in total

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