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SCNpilot_BF_INOC_scaffold_778

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_778_1
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..740
DNA (738bp) protein (246aa)
Transposase n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TBT0_9GAMM
Transposase {ECO:0000313|EMBL:EIT71345.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa
istA3; Transposase for insertion sequences IS1326/IS1353
SCNpilot_BF_INOC_scaffold_778_2
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

733..1539
DNA (807bp) protein (269aa)
IstB-like ATP-binding protein n=2 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZJ16_9GAMM
IstB-like ATP-binding protein {ECO:0000313|EMBL:EIT71909.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydroc
IstB domain-containing protein ATP-binding protein
SCNpilot_BF_INOC_scaffold_778_3
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1790..2254
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI00036EB2FE
Uncharacterized protein {ECO:0000313|EMBL:KIN88510.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
SCNpilot_BF_INOC_scaffold_778_4
unknown

Not on your lists

comp(2448..2996)
DNA (549bp) protein (183aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_778_5
unknown

Not on your lists

3752..4615
DNA (864bp) protein (288aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_778_6
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4744..6135)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Thauera sp. 28 RepID=N6YTF6_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EYR68620.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
SCNpilot_BF_INOC_scaffold_778_7

Not on your lists

comp(6220..7080)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EDV3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD96679.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_778_8
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7102..7995)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens EGD-AQ6 RepID=U1SQJ5_PSEFL
Uncharacterized protein {ECO:0000313|EMBL:ERH48526.1}; TaxID=1390371 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
hypothetical protein
SCNpilot_BF_INOC_scaffold_778_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7992..9413)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMT5_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94322.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
SCNpilot_BF_INOC_scaffold_778_10
unknown

Not on your lists

comp(9534..9785)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_778_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9961..10506)
DNA (546bp) protein (182aa)
Orf22 n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5U2S7_STEMA
Orf22 {ECO:0000313|EMBL:EMI50278.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" so
restriction endonuclease
SCNpilot_BF_INOC_scaffold_778_12
unknown

Not on your lists

comp(10508..11533)
DNA (1026bp) protein (342aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_778_13
unknown

Not on your lists

12025..12114
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_778_14
unknown

Not on your lists

12173..12289
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_778_15
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12286..12969
DNA (684bp) protein (228aa)
Uncharacterized protein {ECO:0000313|EMBL:CAJ19757.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campes
SCNpilot_BF_INOC_scaffold_778_16
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13069..14181
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Pseudomonas tolaasii RepID=UPI0002E1A530
Uncharacterized protein {ECO:0000313|EMBL:CDX46251.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
SCNpilot_BF_INOC_scaffold_778_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14770..15252)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XYJ7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD44609.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
SCNpilot_BF_INOC_scaffold_778_18
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15374..15688)
DNA (315bp) protein (105aa)
UPF0060 membrane protein NT2_06_02200 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YM57_9SPHN
UPF0060 membrane protein NI18_00395 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=
hypothetical protein
SCNpilot_BF_INOC_scaffold_778_19
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15697..16131)
DNA (435bp) protein (145aa)
MerR family transcriptional regulator n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZH17_9BRAD
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:BAM93112.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bra
SCNpilot_BF_INOC_scaffold_778_20
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16222..16587
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ELZ5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV05764.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium met
hypothetical protein
SCNpilot_BF_INOC_scaffold_778_21
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16584..16934
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Marinobacter RepID=H8W7K2_MARHY
Uncharacterized protein {ECO:0000313|EMBL:KFN46193.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
hypothetical protein
SCNpilot_BF_INOC_scaffold_778_22
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16999..18228)
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI000370B9EB
chrA; chromate transporter
Chromate transporter {ECO:0000313|EMBL:CCJ05867.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (stra
SCNpilot_BF_INOC_scaffold_778_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18294..18947)
DNA (654bp) protein (218aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhodanobacter denitrificans RepID=M4NCR4_9GAMM
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGG88454.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodano
SCNpilot_BF_INOC_scaffold_778_24
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19300..19698)
DNA (399bp) protein (133aa)
Putative uncharacterized protein id=2988822 bin=GWF1_Xanthomonadales_69_6 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein Tax=GWF1_Xanthomonadales_69_6_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_778_25
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19691..20020)
DNA (330bp) protein (110aa)
Uncharacterized protein id=2988826 bin=GWF1_Xanthomonadales_69_6 species=Methylophilales bacterium HTCC2181 genus=unknown taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Heavy metal transport/detoxification protein Tax=GWF1_Xanthomonadales_69_6_curated
Heavy metal transport/detoxification protein
SCNpilot_BF_INOC_scaffold_778_26
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20033..20683)
DNA (651bp) protein (217aa)
Uncharacterized protein id=2988828 bin=GWF1_Xanthomonadales_69_6 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein Tax=GWF1_Xanthomonadales_69_6_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_778_27
unknown

Not on your lists

comp(20753..21130)
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_778_28
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21269..21517)
DNA (249bp) protein (83aa)
Carbon storage regulator homolog n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACW6_9GAMM
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregib
rsmE; translational regulator RsmE
SCNpilot_BF_INOC_scaffold_778_29
unknown

Not on your lists

comp(21669..22589)
DNA (921bp) protein (307aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_778_30
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22672..23505
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6CS31_PSEST
Uncharacterized protein {ECO:0000313|EMBL:EWC39944.1}; TaxID=1218352 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutz
Displaying items 1-30 of 47 in total

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