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SCNpilot_BF_INOC_scaffold_42_1

Organism: SCNpilot_BF_INOC_Xanthomonadales_67_72

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(3..170)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system needle syringe protein TssI {ECO:0000313|EMBL:ACH40037.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.; UNIPROT
DB: UniProtKB
  • Identity: 40.0
  • Coverage: 55.0
  • Bit_score: 55
  • Evalue 2.60e-05

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Taxonomy

Geobacter bemidjiensis → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 168
ATGAATCGCACCCTGAACGTCACCACGCCCCTGGGCCCGGAAGTGCTGAAGTTCGACGCACTGCAAGGGAAGGAAAGCCTGTCGCAGCTGTTCGATCTGCAGCTGACGATGAAGAGCGAGGAGCGCGGCATCGGTGCGCCGGCGCTGCTGGGGCAGTCGATCACGGTG
PROTEIN sequence
Length: 56
MNRTLNVTTPLGPEVLKFDALQGKESLSQLFDLQLTMKSEERGIGAPALLGQSITV